RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 MAD2L2Q9UI95 211 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 MGAMO43451 1857 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 FRMPD2Q68DX3 1309 aaPredicted RBP9.76□□□□□ -0.85
VRK3-211ENST00000596445 MYH6P13533 1939 aa9.76□□□□□ -0.85
VRK3-211ENST00000596445 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
VRK3-211ENST00000596445 FKTNO75072 461 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 GOLGA8HP0CJ92 632 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 CALM1P0DP23 149 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 CALM2P0DP24 149 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 CALM3P0DP25 149 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 KIF5BP33176 963 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 RCAN1P53805 252 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 ERVK-9P63128 1117 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 ERVK-24P63145 666 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 SP3Q02447 781 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 SYDE2Q5VT97 1194 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 TTBK2Q6IQ55 1244 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 APOA5Q6Q788 366 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 GPRC5AQ8NFJ5 357 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 NUP133Q8WUM0 1156 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
VRK3-211ENST00000596445 BRF1Q92994 677 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 TBC1D32Q96NH3 1257 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 MYL10Q9BUA6 226 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 TXNRD2Q9NNW7 524 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 BRPF3Q9ULD4 1205 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 BAZ2BQ9UIF8 2168 aaKnown RBP9.75□□□□□ -0.85
VRK3-211ENST00000596445 CENPFP49454 3210 aa9.75□□□□□ -0.85
VRK3-211ENST00000596445 HTTP42858 3142 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 DOCK3Q8IZD9 2030 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 KLF18A0A0U1RQI7 1052 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 KLRF2D3W0D1 207 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 ZBTB43O43298 467 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 ZBED4O75132 1171 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 CNMDO75829 334 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 SLC16A2P36021 539 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 NEK4P51957 841 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 LBX1P52954 281 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 EVCP57679 992 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 CCNA1P78396 465 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 APOBRQ0VD83 1088 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 TOB2Q14106 344 aaPredicted RBP9.74□□□□□ -0.85
VRK3-211ENST00000596445 TMEM132BQ14DG7 1078 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 ANKRD1Q15327 319 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 FANCBQ8NB91 859 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 REPS2Q8NFH8 660 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 CTCFLQ8NI51 663 aaPredicted RBP9.74□□□□□ -0.85
VRK3-211ENST00000596445 SLC38A10Q9HBR0 1119 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 BTBD7Q9P203 1132 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 PRR12Q9ULL5 1215 aa9.74□□□□□ -0.85
VRK3-211ENST00000596445 CTDP1Q9Y5B0 961 aaPredicted RBP9.74□□□□□ -0.85
VRK3-211ENST00000596445 SMCHD1A6NHR9 2005 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 PEX10O60683 326 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 RXRAP19793 462 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 STAT3P40763 770 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 GNAQP50148 359 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 OAZ1P54368 228 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 LACTBP83111 547 aaPredicted RBP9.73□□□□□ -0.85
VRK3-211ENST00000596445 KIF22Q14807 665 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 PPP2R5BQ15173 497 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 Q3C1V9 767 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 ADGRF4Q8IZF3 695 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 IL27Q8NEV9 243 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 ZNF274Q96GC6 653 aaPredicted RBP9.73□□□□□ -0.85
VRK3-211ENST00000596445 ERO1AQ96HE7 468 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 TEX13BQ9BXU2 312 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 UBA5Q9GZZ9 404 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 SPATC1LQ9H0A9 340 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 RANBP17Q9H2T7 1088 aaKnown RBP9.73□□□□□ -0.85
VRK3-211ENST00000596445 ZNF214Q9UL59 606 aaPredicted RBP9.73□□□□□ -0.85
VRK3-211ENST00000596445 NAP1L2Q9ULW6 460 aaPredicted RBP9.73□□□□□ -0.85
VRK3-211ENST00000596445 NID2Q14112 1375 aa9.73□□□□□ -0.85
VRK3-211ENST00000596445 ZSWIM8A7E2V4 1837 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 ZNFX1Q9P2E3 1918 aaKnown RBP9.72□□□□□ -0.85
VRK3-211ENST00000596445 CCDC196A0A1B0GTZ2 297 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 GOLGA8AA7E2F4 631 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 GOLGA8BA8MQT2 603 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 SLC25A27O95847 323 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 SMARCA1P28370 1054 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 PDIA3P30101 505 aaKnown RBP9.72□□□□□ -0.85
VRK3-211ENST00000596445 MAPK4P31152 587 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 PSMC4P43686 418 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 METAP2P50579 478 aaKnown RBP eCLIP9.72□□□□□ -0.85
VRK3-211ENST00000596445 AK2P54819 239 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 PLS1Q14651 629 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 ARHGEF6Q15052 776 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 RABEP1Q15276 862 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 RTN1Q16799 776 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 RIOX2Q8IUF8 465 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 CCAR1Q8IX12 1150 aaKnown RBP9.72□□□□□ -0.85
VRK3-211ENST00000596445 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 CPXCR1Q8N123 301 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 SHCBP1Q8NEM2 672 aa9.72□□□□□ -0.85
VRK3-211ENST00000596445 CD99L2Q8TCZ2 262 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms