RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 LCTP09848 1927 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 PRC1O43663 620 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 SNHG28P0DPA3 235 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 TAL1P17542 331 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 ERCC3P19447 782 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 HOXD10P28358 340 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 HSPA4P34932 840 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 SLC4A3P48751 1232 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 TMEM67Q5HYA8 995 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 PLEKHH3Q7Z736 793 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 FAM160B2Q86V87 743 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 CPXCR1Q8N123 301 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 RAET1EQ8TD07 263 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 IGDCC4Q8TDY8 1250 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 SH3TC2Q8TF17 1288 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 TCEANC2Q96MN5 208 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 CWC22Q9HCG8 908 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 GJD2Q9UKL4 321 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 PRR12Q9ULL5 1215 aa16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 CAPN15O75808 1086 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 CPA1P15085 419 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 ELNP15502 786 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 PRMT2P55345 433 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 WTAPQ15007 396 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 NCAPG2Q86XI2 1143 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 CHURC1Q8WUH1 139 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 KCNB2Q92953 911 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 SLC38A10Q9HBR0 1119 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 SNX14Q9Y5W7 946 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 MCM3APO60318 1980 aa16.15■□□□□ 0.18
SHKBP1-207ENST00000595631 ERICH2A1L162 156 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 CCDC85CA6NKD9 419 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 PLA2G6O60733 806 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 ZBED4O75132 1171 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 MYCP01106 439 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 CYP2B6P20813 491 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 PTPREP23469 700 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 MCM5P33992 734 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 STAT3P40763 770 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 TSGA10IPQ3SY00 556 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 SLC9C1Q4G0N8 1177 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 MORN1Q5T089 497 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 SYDE2Q5VT97 1194 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 SNRNP48Q6IEG0 339 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 CCDC174Q6PII3 467 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 BTNL9Q6UXG8 535 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 RIOX2Q8IUF8 465 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 STAG2Q8N3U4 1231 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 SHCBP1Q8NEM2 672 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 NEK1Q96PY6 1258 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 USP26Q9BXU7 913 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 ZNF536O15090 1300 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 HTTP42858 3142 aa16.14■□□□□ 0.17
SHKBP1-207ENST00000595631 SH2B2O14492 632 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 ADCY3O60266 1144 aa16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 USP6NLQ92738 828 aa16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 NUDT12Q9BQG2 462 aa16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 MYL10Q9BUA6 226 aa16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 TEX13BQ9BXU2 312 aa16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 UBA5Q9GZZ9 404 aa16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 CTDP1Q9Y5B0 961 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-207ENST00000595631 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 SEC24BO95487 1268 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 PARP1P09874 1014 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 IRF5Q13568 498 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 GRB14Q14449 540 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 RAB11FIP4Q86YS3 637 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 AGBL1Q96MI9 1066 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 JAKMIP1Q96N16 626 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 RANBP17Q9H2T7 1088 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 MROH8Q9H579 483 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 IVNS1ABPQ9Y6Y0 642 aa16.12■□□□□ 0.17
SHKBP1-207ENST00000595631 SLC15A5A6NIM6 579 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 ATP2A1O14983 1001 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 SLC25A27O95847 323 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 GRK4P32298 578 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 EXOSC10Q01780 885 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 MAP2K5Q13163 448 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 KRT32Q14532 448 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 GRM4Q14833 912 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 CCL14Q16627 93 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 ASPRV1Q53RT3 343 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 GPATCH4Q5T3I0 446 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 ZNF654Q8IZM8 581 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 NPLOC4Q8TAT6 608 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 SOCS4Q8WXH5 440 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 ARMC5Q96C12 935 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 TMEM87BQ96K49 555 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 MAD2L2Q9UI95 211 aa16.11■□□□□ 0.17
SHKBP1-207ENST00000595631 COBLO75128 1261 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 RXRAP19793 462 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 ADORA2AP29274 412 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms