RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 STRBPQ96SI9 672 aaKnown RBP22.32■■□□□ 1.16
PDE4C-208ENST00000595343 TSEN34Q9BSV6 310 aaKnown RBP22.32■■□□□ 1.16
PDE4C-208ENST00000595343 LRRCC1Q9C099 1032 aa22.32■■□□□ 1.16
PDE4C-208ENST00000595343 CHMP4BQ9H444 224 aaKnown RBP22.32■■□□□ 1.16
PDE4C-208ENST00000595343 EYSQ5T1H1 3165 aa22.31■■□□□ 1.16
PDE4C-208ENST00000595343 ACLYP53396 1101 aa22.31■■□□□ 1.16
PDE4C-208ENST00000595343 DDX11Q96FC9 970 aa22.31■■□□□ 1.16
PDE4C-208ENST00000595343 TMEM39AQ9NV64 488 aa22.31■■□□□ 1.16
PDE4C-208ENST00000595343 NYAP2Q9P242 653 aa22.31■■□□□ 1.16
PDE4C-208ENST00000595343 RIPK3Q9Y572 518 aa22.31■■□□□ 1.16
PDE4C-208ENST00000595343 SYNRGQ9UMZ2 1314 aa22.31■■□□□ 1.16
PDE4C-208ENST00000595343 GSG1L2A8MUP6 293 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 F5H6K3 240 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 SMARCA5O60264 1052 aaPredicted RBP22.3■■□□□ 1.16
PDE4C-208ENST00000595343 SNAI1O95863 264 aaPredicted RBP22.3■■□□□ 1.16
PDE4C-208ENST00000595343 NDUFB10O96000 172 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 KLRC3Q07444 240 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 ANKRD33Q7Z3H0 272 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 STK11IPQ8N1F8 1099 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 PRPF38AQ8NAV1 312 aaKnown RBP22.3■■□□□ 1.16
PDE4C-208ENST00000595343 TOX2Q96NM4 488 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 MKNK2Q9HBH9 465 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 FAM184BQ9ULE4 1060 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 SYNGAP1Q96PV0 1343 aa22.3■■□□□ 1.16
PDE4C-208ENST00000595343 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 FPGSQ05932 587 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 FAAP100Q0VG06 881 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 GIMAP6Q6P9H5 292 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 MAMDC4Q6UXC1 1216 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 KLHDC9Q8NEP7 349 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 NUP133Q8WUM0 1156 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 STARD7Q9NQZ5 370 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 CDH23Q9H251 3354 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 VCANP13611 3396 aa22.29■■□□□ 1.16
PDE4C-208ENST00000595343 TMEM265A0A087WTH1 108 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 MOXD2PA6NHM9 499 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 DCDC2CA8MYV0 355 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 MINDY4BA8MYZ0 360 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 ATP2A1O14983 1001 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 KCNA10Q16322 511 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 CCSAPQ6IQ19 270 aaPredicted RBP22.28■■□□□ 1.16
PDE4C-208ENST00000595343 CPXCR1Q8N123 301 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 ECHDC1Q9NTX5 307 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 CLIP2Q9UDT6 1046 aa22.28■■□□□ 1.16
PDE4C-208ENST00000595343 ZHX1Q9UKY1 873 aaPredicted RBP22.28■■□□□ 1.16
PDE4C-208ENST00000595343 ZBED4O75132 1171 aa22.27■■□□□ 1.16
PDE4C-208ENST00000595343 FOSL2P15408 326 aa22.27■■□□□ 1.16
PDE4C-208ENST00000595343 SLC4A3P48751 1232 aa22.27■■□□□ 1.16
PDE4C-208ENST00000595343 ZNF467Q7Z7K2 595 aaPredicted RBP22.27■■□□□ 1.16
PDE4C-208ENST00000595343 OSBP2Q969R2 916 aa22.27■■□□□ 1.16
PDE4C-208ENST00000595343 PRUNE2Q8WUY3 3088 aa22.27■■□□□ 1.15
PDE4C-208ENST00000595343 IGKV6D-41A0A0C4DH26 115 aa22.26■■□□□ 1.15
PDE4C-208ENST00000595343 MYADML2A6NDP7 307 aa22.26■■□□□ 1.15
PDE4C-208ENST00000595343 DUSP11O75319 330 aaKnown RBP22.26■■□□□ 1.15
PDE4C-208ENST00000595343 KBTBD3Q8NAB2 608 aa22.26■■□□□ 1.15
PDE4C-208ENST00000595343 RAVER2Q9HCJ3 691 aaKnown RBP22.26■■□□□ 1.15
PDE4C-208ENST00000595343 CTDP1Q9Y5B0 961 aaPredicted RBP22.26■■□□□ 1.15
PDE4C-208ENST00000595343 ACVR2BQ13705 512 aa22.25■■□□□ 1.15
PDE4C-208ENST00000595343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.25■■□□□ 1.15
PDE4C-208ENST00000595343 APPBP2Q92624 585 aa22.25■■□□□ 1.15
PDE4C-208ENST00000595343 KIFC2Q96AC6 838 aa22.25■■□□□ 1.15
PDE4C-208ENST00000595343 SLC38A10Q9HBR0 1119 aa22.25■■□□□ 1.15
PDE4C-208ENST00000595343 EPB41L4AQ9HCS5 686 aaPredicted RBP22.25■■□□□ 1.15
PDE4C-208ENST00000595343 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.25■■□□□ 1.15
PDE4C-208ENST00000595343 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.24■■□□□ 1.15
PDE4C-208ENST00000595343 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.24■■□□□ 1.15
PDE4C-208ENST00000595343 TIMP1P01033 207 aa22.24■■□□□ 1.15
PDE4C-208ENST00000595343 CST5P28325 142 aaPredicted RBP22.24■■□□□ 1.15
PDE4C-208ENST00000595343 IRX5P78411 483 aaPredicted RBP22.24■■□□□ 1.15
PDE4C-208ENST00000595343 MKL1Q969V6 931 aa22.24■■□□□ 1.15
PDE4C-208ENST00000595343 GLT1D1Q96MS3 346 aa22.24■■□□□ 1.15
PDE4C-208ENST00000595343 FEM1BQ9UK73 627 aa22.24■■□□□ 1.15
PDE4C-208ENST00000595343 TBX21Q9UL17 535 aa22.24■■□□□ 1.15
PDE4C-208ENST00000595343 ELP1O95163 1332 aa22.24■■□□□ 1.15
PDE4C-208ENST00000595343 RNF113AO15541 343 aaKnown RBP22.23■■□□□ 1.15
PDE4C-208ENST00000595343 GPAA1O43292 621 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 ADCY6O43306 1168 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 PRDM1O75626 825 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 C6orf222P0C671 652 aaPredicted RBP22.23■■□□□ 1.15
PDE4C-208ENST00000595343 TDO2P48775 406 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 ZNF444Q8N0Y2 327 aaPredicted RBP22.23■■□□□ 1.15
PDE4C-208ENST00000595343 ANKRD35Q8N283 1001 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 PCSK9Q8NBP7 692 aaKnown RBP22.23■■□□□ 1.15
PDE4C-208ENST00000595343 CEP95Q96GE4 821 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 FGD4Q96M96 766 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 ABHD16BQ9H3Z7 469 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 MTMR4Q9NYA4 1195 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 FBXO40Q9UH90 709 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 MYH4Q9Y623 1939 aa22.23■■□□□ 1.15
PDE4C-208ENST00000595343 ASGR1P07306 291 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 DNAJB2P25686 324 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 CDK7P50613 346 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 GRIN2CQ14957 1233 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 CCDC144BQ3MJ40 725 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 CHST13Q8NET6 341 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.22■■□□□ 1.153e-7■■■■■ 35.2
PDE4C-208ENST00000595343 UPF3AQ9H1J1 476 aaKnown RBP22.22■■□□□ 1.15
PDE4C-208ENST00000595343 ZNF287Q9HBT7 754 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 RCAN3Q9UKA8 241 aa22.22■■□□□ 1.15
PDE4C-208ENST00000595343 SYNPO2Q9UMS6 1093 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms