RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ELNP15502 786 aa25.74■■□□□ 1.71
HOMER3-206ENST00000594439 STAT3P40763 770 aa25.74■■□□□ 1.71
HOMER3-206ENST00000594439 SEC23AQ15436 765 aa25.74■■□□□ 1.71
HOMER3-206ENST00000594439 CCDC96Q2M329 555 aa25.74■■□□□ 1.71
HOMER3-206ENST00000594439 RALYLQ86SE5 291 aaKnown RBP25.74■■□□□ 1.71
HOMER3-206ENST00000594439 UBAC1Q9BSL1 405 aa25.74■■□□□ 1.71
HOMER3-206ENST00000594439 MROH8Q9H579 483 aa25.74■■□□□ 1.71
HOMER3-206ENST00000594439 ZNF236Q9UL36 1845 aa25.74■■□□□ 1.71
HOMER3-206ENST00000594439 ZBED4O75132 1171 aa25.73■■□□□ 1.71
HOMER3-206ENST00000594439 SLC25A27O95847 323 aa25.73■■□□□ 1.71
HOMER3-206ENST00000594439 CYP2B6P20813 491 aa25.73■■□□□ 1.71
HOMER3-206ENST00000594439 NCAPG2Q86XI2 1143 aa25.73■■□□□ 1.71
HOMER3-206ENST00000594439 MB21D2Q8IYB1 491 aaPredicted RBP25.73■■□□□ 1.71
HOMER3-206ENST00000594439 PNMA1Q8ND90 353 aa25.73■■□□□ 1.71
HOMER3-206ENST00000594439 RBBP6Q7Z6E9 1792 aaKnown RBP25.72■■□□□ 1.71
HOMER3-206ENST00000594439 ATP2A1O14983 1001 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 FDX1P10109 184 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 XRCC5P13010 732 aaKnown RBP25.72■■□□□ 1.71
HOMER3-206ENST00000594439 RGS2P41220 211 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 SOX10P56693 466 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 IKQ13123 557 aaPredicted RBP25.72■■□□□ 1.71
HOMER3-206ENST00000594439 MAP2K5Q13163 448 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 GRB14Q14449 540 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 TTBK2Q6IQ55 1244 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 BTNL9Q6UXG8 535 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 TEX13BQ9BXU2 312 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 KAT14Q9H8E8 782 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 IVNS1ABPQ9Y6Y0 642 aa25.72■■□□□ 1.71
HOMER3-206ENST00000594439 ZNFX1Q9P2E3 1918 aaKnown RBP25.71■■□□□ 1.71
HOMER3-206ENST00000594439 FRMPD2Q68DX3 1309 aaPredicted RBP25.71■■□□□ 1.71
HOMER3-206ENST00000594439 ANTXR2P58335 489 aa25.71■■□□□ 1.71
HOMER3-206ENST00000594439 ZNF543Q08ER8 600 aa25.71■■□□□ 1.71
HOMER3-206ENST00000594439 GPCPD1Q9NPB8 672 aa25.71■■□□□ 1.71
HOMER3-206ENST00000594439 PRR12Q9ULL5 1215 aa25.71■■□□□ 1.71
HOMER3-206ENST00000594439 STRNO43815 780 aa25.7■■□□□ 1.7
HOMER3-206ENST00000594439 COPB2P35606 906 aa25.7■■□□□ 1.7
HOMER3-206ENST00000594439 IFIT1BQ5T764 474 aaKnown RBP25.7■■□□□ 1.7
HOMER3-206ENST00000594439 SNRNP48Q6IEG0 339 aaKnown RBP25.7■■□□□ 1.7
HOMER3-206ENST00000594439 CPXCR1Q8N123 301 aa25.7■■□□□ 1.7
HOMER3-206ENST00000594439 APBA2Q99767 749 aa25.7■■□□□ 1.7
HOMER3-206ENST00000594439 RAVER2Q9HCJ3 691 aaKnown RBP25.7■■□□□ 1.7
HOMER3-206ENST00000594439 BIN2Q9UBW5 565 aaPredicted RBP25.7■■□□□ 1.7
HOMER3-206ENST00000594439 CTDP1Q9Y5B0 961 aaPredicted RBP25.7■■□□□ 1.7
HOMER3-206ENST00000594439 INHAP05111 366 aa25.69■■□□□ 1.7
HOMER3-206ENST00000594439 OAZ1P54368 228 aa25.69■■□□□ 1.7
HOMER3-206ENST00000594439 MTFR1Q15390 333 aa25.69■■□□□ 1.7
HOMER3-206ENST00000594439 CHST3Q7LGC8 479 aa25.69■■□□□ 1.7
HOMER3-206ENST00000594439 TRIB2Q92519 343 aa25.69■■□□□ 1.7
HOMER3-206ENST00000594439 RIPK3Q9Y572 518 aa25.69■■□□□ 1.7
HOMER3-206ENST00000594439 KIAA0100Q14667 2235 aaKnown RBP25.68■■□□□ 1.7
HOMER3-206ENST00000594439 ZNF536O15090 1300 aa25.68■■□□□ 1.7
HOMER3-206ENST00000594439 IFIT3O14879 490 aaKnown RBP25.68■■□□□ 1.7
HOMER3-206ENST00000594439 MYCP01106 439 aaPredicted RBP25.68■■□□□ 1.7
HOMER3-206ENST00000594439 HOXC6P09630 235 aa25.68■■□□□ 1.7
HOMER3-206ENST00000594439 SLC16A2P36021 539 aa25.68■■□□□ 1.7
HOMER3-206ENST00000594439 UBXN2AP68543 259 aa25.68■■□□□ 1.7
HOMER3-206ENST00000594439 COL9A3Q14050 684 aaPredicted RBP25.68■■□□□ 1.7
HOMER3-206ENST00000594439 SYDE2Q5VT97 1194 aa25.68■■□□□ 1.7
HOMER3-206ENST00000594439 RNF20Q5VTR2 975 aa25.68■■□□□ 1.7
HOMER3-206ENST00000594439 ABRAQ8N0Z2 381 aa25.68■■□□□ 1.7
HOMER3-206ENST00000594439 HMGCRP04035 888 aa25.67■■□□□ 1.7
HOMER3-206ENST00000594439 ADORA2AP29274 412 aa25.67■■□□□ 1.7
HOMER3-206ENST00000594439 SNAP25P60880 206 aa25.67■■□□□ 1.7
HOMER3-206ENST00000594439 CCL14Q16627 93 aa25.67■■□□□ 1.7
HOMER3-206ENST00000594439 GPATCH4Q5T3I0 446 aaKnown RBP25.67■■□□□ 1.7
HOMER3-206ENST00000594439 SENP2Q9HC62 589 aa25.67■■□□□ 1.7
HOMER3-206ENST00000594439 GOLGA8HP0CJ92 632 aa25.66■■□□□ 1.7
HOMER3-206ENST00000594439 FCER1AP12319 257 aa25.66■■□□□ 1.7
HOMER3-206ENST00000594439 TRIM32Q13049 653 aa25.66■■□□□ 1.7
HOMER3-206ENST00000594439 TSGA10IPQ3SY00 556 aa25.66■■□□□ 1.7
HOMER3-206ENST00000594439 TRMT44Q8IYL2 757 aaKnown RBP25.66■■□□□ 1.7
HOMER3-206ENST00000594439 RASEFQ8IZ41 740 aa25.66■■□□□ 1.7
HOMER3-206ENST00000594439 NPLOC4Q8TAT6 608 aa25.66■■□□□ 1.7
HOMER3-206ENST00000594439 IGDCC4Q8TDY8 1250 aa25.66■■□□□ 1.7
HOMER3-206ENST00000594439 RANBP17Q9H2T7 1088 aaKnown RBP25.66■■□□□ 1.7
HOMER3-206ENST00000594439 ERICH2A1L162 156 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 POTEFA5A3E0 1075 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 COBLO75128 1261 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 CCL5P13501 91 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 ZKSCAN1P17029 563 aaPredicted RBP25.65■■□□□ 1.7
HOMER3-206ENST00000594439 SLC4A3P48751 1232 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 WTAPQ15007 396 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 SART3Q15020 963 aaKnown RBP25.65■■□□□ 1.7
HOMER3-206ENST00000594439 TMEM67Q5HYA8 995 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 AGBL1Q96MI9 1066 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 MMP19Q99542 508 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 MTA3Q9BTC8 594 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 TMEM106CQ9BVX2 250 aa25.65■■□□□ 1.7
HOMER3-206ENST00000594439 PRC1O43663 620 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 REC8O95072 547 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 MCM5P33992 734 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 RGS19P49795 217 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 ASPRV1Q53RT3 343 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 CCDC174Q6PII3 467 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 DPP9Q86TI2 863 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 KCNB2Q92953 911 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 UNC93B1Q9H1C4 597 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 FLRT1Q9NZU1 646 aa25.64■■□□□ 1.7
HOMER3-206ENST00000594439 SMCHD1A6NHR9 2005 aa25.64■■□□□ 1.69
HOMER3-206ENST00000594439 KCTD2Q14681 263 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms