RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 USP17L21D6R901 530 aa23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 SLFNL1Q499Z3 407 aa23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 MFSD5Q6N075 450 aa23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 C16orf86Q6ZW13 317 aa23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 KLHDC9Q8NEP7 349 aa23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 VTI1AQ96AJ9 217 aa23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 GLT1D1Q96MS3 346 aa23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 GAS2L1Q99501 681 aaPredicted RBP23.61■■□□□ 1.37
PRKCSH-216ENST00000592445 MROH7Q68CQ1 1323 aa23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 SYNGAP1Q96PV0 1343 aa23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 ADD2P35612 726 aa23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 PPIGQ13427 754 aaKnown RBP eCLIP23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 SNRNP48Q6IEG0 339 aaKnown RBP23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 REPS2Q8NFH8 660 aa23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 TEX13BQ9BXU2 312 aa23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.6■■□□□ 1.371e-8■■□□□ 13.5
PRKCSH-216ENST00000592445 PAG1Q9NWQ8 432 aa23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 TBX21Q9UL17 535 aa23.6■■□□□ 1.37
PRKCSH-216ENST00000592445 DUSP11O75319 330 aaKnown RBP23.59■■□□□ 1.37
PRKCSH-216ENST00000592445 SNAI1O95863 264 aaPredicted RBP23.59■■□□□ 1.37
PRKCSH-216ENST00000592445 C6orf222P0C671 652 aaPredicted RBP23.59■■□□□ 1.37
PRKCSH-216ENST00000592445 SLC4A3P48751 1232 aa23.59■■□□□ 1.37
PRKCSH-216ENST00000592445 KIF1BPQ96EK5 621 aa23.59■■□□□ 1.37
PRKCSH-216ENST00000592445 SLF1Q9BQI6 1058 aa23.59■■□□□ 1.37
PRKCSH-216ENST00000592445 ELP1O95163 1332 aa23.59■■□□□ 1.37
PRKCSH-216ENST00000592445 COL9A1P20849 921 aa23.58■■□□□ 1.37
PRKCSH-216ENST00000592445 CCSAPQ6IQ19 270 aaPredicted RBP23.58■■□□□ 1.37
PRKCSH-216ENST00000592445 PCSK9Q8NBP7 692 aaKnown RBP23.58■■□□□ 1.37
PRKCSH-216ENST00000592445 PBX4Q9BYU1 374 aa23.58■■□□□ 1.37
PRKCSH-216ENST00000592445 BOLA2Q9H3K6 86 aa23.58■■□□□ 1.37
PRKCSH-216ENST00000592445 SPC25Q9HBM1 224 aa23.58■■□□□ 1.37
PRKCSH-216ENST00000592445 SLC4A4Q9Y6R1 1079 aa23.58■■□□□ 1.37
PRKCSH-216ENST00000592445 BAZ2AQ9UIF9 1905 aaKnown RBP23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 MYADML2A6NDP7 307 aa23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 GRXCR1A8MXD5 290 aa23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 PBX2P40425 430 aa23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 TMEM240Q5SV17 173 aa23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 MAMDC4Q6UXC1 1216 aa23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 TMEM199Q8N511 208 aa23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 NUP88Q99567 741 aaPredicted RBP23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 CTDP1Q9Y5B0 961 aaPredicted RBP23.57■■□□□ 1.36
PRKCSH-216ENST00000592445 ASGR1P07306 291 aa23.56■■□□□ 1.36
PRKCSH-216ENST00000592445 CSF2RAP15509 400 aa23.56■■□□□ 1.36
PRKCSH-216ENST00000592445 C16orf59Q7L2K0 433 aa23.56■■□□□ 1.36
PRKCSH-216ENST00000592445 ATXN2LQ8WWM7 1075 aaKnown RBP23.56■■□□□ 1.36
PRKCSH-216ENST00000592445 PRDM12Q9H4Q4 367 aa23.56■■□□□ 1.36
PRKCSH-216ENST00000592445 RIPK3Q9Y572 518 aa23.56■■□□□ 1.36
PRKCSH-216ENST00000592445 ACRP10323 421 aa23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 CST5P28325 142 aaPredicted RBP23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 CDK7P50613 346 aa23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 ACVR2BQ13705 512 aa23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 CTR9Q6PD62 1173 aa23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 PSRC1Q6PGN9 363 aaPredicted RBP23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 ZNF467Q7Z7K2 595 aaPredicted RBP23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 CPXCR1Q8N123 301 aa23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 PPP1R12CQ9BZL4 782 aa23.55■■□□□ 1.36
PRKCSH-216ENST00000592445 DNAJC25-GNG10A0A024R161 153 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 A0A0U1RQG5 324 aaPredicted RBP23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 ARVCFO00192 962 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 TLR3O15455 904 aaKnown RBP23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 ZBED4O75132 1171 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 IRX5P78411 483 aaPredicted RBP23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 CCDC144BQ3MJ40 725 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 GNASQ5JWF2 1037 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 AKNAD1Q5T1N1 836 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 ZNF365Q70YC5 407 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 PRPF38AQ8NAV1 312 aaKnown RBP23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 THEGQ9P2T0 379 aa23.54■■□□□ 1.36
PRKCSH-216ENST00000592445 CHGBP05060 677 aa23.53■■□□□ 1.36
PRKCSH-216ENST00000592445 UBE3CQ15386 1083 aa23.53■■□□□ 1.36
PRKCSH-216ENST00000592445 RASIP1Q5U651 963 aa23.53■■□□□ 1.36
PRKCSH-216ENST00000592445 ANKRD35Q8N283 1001 aa23.53■■□□□ 1.36
PRKCSH-216ENST00000592445 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.53■■□□□ 1.36
PRKCSH-216ENST00000592445 ABHD16BQ9H3Z7 469 aa23.53■■□□□ 1.36
PRKCSH-216ENST00000592445 MSRAQ9UJ68 235 aa23.53■■□□□ 1.36
PRKCSH-216ENST00000592445 F5H6K3 240 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 HMMRO75330 724 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 ATP5JP18859 108 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 IGFBP4P22692 258 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 GJA9P57773 515 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 KLRC3Q07444 240 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 CCDC85BQ15834 202 aaPredicted RBP23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 STK11IPQ8N1F8 1099 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 ASB2Q96Q27 587 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 HAUS7Q99871 368 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 MKNK2Q9HBH9 465 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 ARPP21Q9UBL0 812 aaPredicted RBP23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
PRKCSH-216ENST00000592445 ADCY6O43306 1168 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 NDUFB10O96000 172 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 RAB30Q15771 203 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 ZSCAN25Q6NSZ9 544 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 FAM126BQ8IXS8 530 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 IL27Q8NEV9 243 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 ADAMTS19Q8TE59 1207 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 KIFC2Q96AC6 838 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 UPF3AQ9H1J1 476 aaKnown RBP23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 MTIF3Q9H2K0 278 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms