RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	CCSAP	Q6IQ19	270 aa	Predicted RBP	21.95	■■□□□ 1.1
CIRBP-238	ENST00000592412	KLHDC9	Q8NEP7	349 aa		21.95	■■□□□ 1.1
CIRBP-238	ENST00000592412	STRBP	Q96SI9	672 aa	Known RBP	21.95	■■□□□ 1.1
CIRBP-238	ENST00000592412	ARPP21	Q9UBL0	812 aa	Predicted RBP	21.95	■■□□□ 1.1
CIRBP-238	ENST00000592412	MYADML2	A6NDP7	307 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	GSG1L2	A8MUP6	293 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	MS4A1	P11836	297 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	COPB2	P35606	906 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	ACLY	P53396	1101 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	ANKRD33	Q7Z3H0	272 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	RNPC3	Q96LT9	517 aa	Known RBP	21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	SLF1	Q9BQI6	1058 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	TEX13B	Q9BXU2	312 aa		21.94	■■□□□ 1.1
CIRBP-238	ENST00000592412	IGKV6D-41	A0A0C4DH26	115 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412		F5H6K3	240 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	ADCY6	O43306	1168 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	SMARCA5	O60264	1052 aa	Predicted RBP	21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	NDUFB10	O96000	172 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	RAG1	P15918	1043 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	KLRC3	Q07444	240 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	SBK1	Q52WX2	424 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	SNRNP48	Q6IEG0	339 aa	Known RBP	21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	MAMDC4	Q6UXC1	1216 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	DDRGK1	Q96HY6	314 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	FGD4	Q96M96	766 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	TOX2	Q96NM4	488 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	SYNGAP1	Q96PV0	1343 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	TSEN34	Q9BSV6	310 aa	Known RBP	21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	NYAP2	Q9P242	653 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	CNPY2	Q9Y2B0	182 aa		21.93	■■□□□ 1.1
CIRBP-238	ENST00000592412	STK11IP	Q8N1F8	1099 aa		21.92	■■□□□ 1.1
CIRBP-238	ENST00000592412	MSL3	Q8N5Y2	521 aa	Known RBP	21.92	■■□□□ 1.1
CIRBP-238	ENST00000592412	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	21.92	■■□□□ 1.1
CIRBP-238	ENST00000592412	TMEM39A	Q9NV64	488 aa		21.92	■■□□□ 1.1
CIRBP-238	ENST00000592412	CHD7	Q9P2D1	2997 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	ATP2A1	O14983	1001 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	FPGS	Q05932	587 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	KCNA10	Q16322	511 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	ZSCAN25	Q6NSZ9	544 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	OSBP2	Q969R2	916 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	STARD7	Q9NQZ5	370 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	TBX21	Q9UL17	535 aa		21.91	■■□□□ 1.1
CIRBP-238	ENST00000592412	TMEM265	A0A087WTH1	108 aa		21.9	■■□□□ 1.1
CIRBP-238	ENST00000592412	FOSL2	P15408	326 aa		21.9	■■□□□ 1.1
CIRBP-238	ENST00000592412	PRPF38A	Q8NAV1	312 aa	Known RBP	21.9	■■□□□ 1.1
CIRBP-238	ENST00000592412	LRRCC1	Q9C099	1032 aa		21.9	■■□□□ 1.1
CIRBP-238	ENST00000592412	ZHX1	Q9UKY1	873 aa	Predicted RBP	21.9	■■□□□ 1.1
CIRBP-238	ENST00000592412	FAM184B	Q9ULE4	1060 aa		21.9	■■□□□ 1.1
CIRBP-238	ENST00000592412	MOXD2P	A6NHM9	499 aa		21.89	■■□□□ 1.09
CIRBP-238	ENST00000592412	GIMAP6	Q6P9H5	292 aa		21.89	■■□□□ 1.09
CIRBP-238	ENST00000592412	MCM3AP	O60318	1980 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	MYH4	Q9Y623	1939 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	DUSP11	O75319	330 aa	Known RBP	21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	CST5	P28325	142 aa	Predicted RBP	21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	CDK7	P50613	346 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	GRIN2C	Q14957	1233 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	C20orf194	Q5TEA3	1177 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	C16orf59	Q7L2K0	433 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	ZNF467	Q7Z7K2	595 aa	Predicted RBP	21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	CPXCR1	Q8N123	301 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	KBTBD3	Q8NAB2	608 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	NUP133	Q8WUM0	1156 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	DDX11	Q96FC9	970 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	21.88	■■□□□ 1.09	8e-8	■□□□□ 11.1
CIRBP-238	ENST00000592412	SLC38A10	Q9HBR0	1119 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	RAVER2	Q9HCJ3	691 aa	Known RBP	21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	CLIP2	Q9UDT6	1046 aa		21.88	■■□□□ 1.09
CIRBP-238	ENST00000592412	DCDC2C	A8MYV0	355 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	MINDY4B	A8MYZ0	360 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	TIMP1	P01033	207 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	DNAJB2	P25686	324 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	ACVR2B	Q13705	512 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	TSHZ3	Q63HK5	1081 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	USP38	Q8NB14	1042 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	MKL1	Q969V6	931 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	KATNBL1	Q9H079	304 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	UPF3A	Q9H1J1	476 aa	Known RBP	21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	MKNK2	Q9HBH9	465 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	ECHDC1	Q9NTX5	307 aa		21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	21.87	■■□□□ 1.09
CIRBP-238	ENST00000592412	REV3L	O60673	3130 aa		21.86	■■□□□ 1.09
CIRBP-238	ENST00000592412	CTAGE5	O15320	804 aa		21.86	■■□□□ 1.09
CIRBP-238	ENST00000592412	PRDM1	O75626	825 aa		21.86	■■□□□ 1.09
CIRBP-238	ENST00000592412	SLC4A3	P48751	1232 aa		21.86	■■□□□ 1.09
CIRBP-238	ENST00000592412	APPBP2	Q92624	585 aa		21.86	■■□□□ 1.09
CIRBP-238	ENST00000592412	KIFC2	Q96AC6	838 aa		21.86	■■□□□ 1.09
CIRBP-238	ENST00000592412	CEP95	Q96GE4	821 aa		21.86	■■□□□ 1.09
CIRBP-238	ENST00000592412	ELP1	O95163	1332 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412		M0R2C6	588 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	ZBED4	O75132	1171 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	ASGR1	P07306	291 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	GJA9	P57773	515 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	CCDC144B	Q3MJ40	725 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	RASIP1	Q5U651	963 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	MFSD5	Q6N075	450 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	MTMR4	Q9NYA4	1195 aa		21.85	■■□□□ 1.09
CIRBP-238	ENST00000592412	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	21.84	■■□□□ 1.09
CIRBP-238	ENST00000592412	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	21.84	■■□□□ 1.09
CIRBP-238	ENST00000592412	GPAA1	O43292	621 aa		21.84	■■□□□ 1.09

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