RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ZNF214Q9UL59 606 aaPredicted RBP16.45■□□□□ 0.22
CLIP3-205ENST00000592017 STAT3P40763 770 aa16.44■□□□□ 0.22
CLIP3-205ENST00000592017 HABP4Q5JVS0 413 aaKnown RBP16.44■□□□□ 0.22
CLIP3-205ENST00000592017 PPP4R3BQ5MIZ7 849 aa16.44■□□□□ 0.22
CLIP3-205ENST00000592017 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
CLIP3-205ENST00000592017 ABRAQ8N0Z2 381 aa16.44■□□□□ 0.22
CLIP3-205ENST00000592017 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
CLIP3-205ENST00000592017 COLQQ9Y215 455 aaPredicted RBP16.44■□□□□ 0.22
CLIP3-205ENST00000592017 MTMR7Q9Y216 660 aa16.44■□□□□ 0.22
CLIP3-205ENST00000592017 RLFQ13129 1914 aa16.44■□□□□ 0.22
CLIP3-205ENST00000592017 SGSM2O43147 1006 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 SLC25A27O95847 323 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 FGRP09769 529 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 PCP11498 1178 aaKnown RBP16.43■□□□□ 0.22
CLIP3-205ENST00000592017 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 OLFML2BQ68BL8 750 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 GMCL1P1Q8NEA9 526 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
CLIP3-205ENST00000592017 RANBP2P49792 3224 aaKnown RBP16.43■□□□□ 0.22
CLIP3-205ENST00000592017 FCER1AP12319 257 aa16.42■□□□□ 0.22
CLIP3-205ENST00000592017 PTH1RQ03431 593 aa16.42■□□□□ 0.22
CLIP3-205ENST00000592017 ESR2Q92731 530 aa16.42■□□□□ 0.22
CLIP3-205ENST00000592017 SYNPO2Q9UMS6 1093 aa16.42■□□□□ 0.22
CLIP3-205ENST00000592017 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
CLIP3-205ENST00000592017 NR2E3Q9Y5X4 410 aa16.42■□□□□ 0.22
CLIP3-205ENST00000592017 EVI5O60447 810 aa16.41■□□□□ 0.22
CLIP3-205ENST00000592017 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
CLIP3-205ENST00000592017 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
CLIP3-205ENST00000592017 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
CLIP3-205ENST00000592017 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
CLIP3-205ENST00000592017 MMP19Q99542 508 aa16.41■□□□□ 0.22
CLIP3-205ENST00000592017 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
CLIP3-205ENST00000592017 C11orf49Q9H6J7 331 aa16.41■□□□□ 0.22
CLIP3-205ENST00000592017 DDX20Q9UHI6 824 aaKnown RBP16.41■□□□□ 0.22
CLIP3-205ENST00000592017 B4E1Z4 1266 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 KDM4AO75164 1064 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 PGK2P07205 417 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 COL6A1P12109 1028 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 BMP3P12645 472 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 CYBAP13498 195 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 CNGA1P29973 690 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 SLC1A4P43007 532 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 PRAMEF19Q5SWL8 479 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 KIAA1211Q6ZU35 1233 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 TEX13BQ9BXU2 312 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
CLIP3-205ENST00000592017 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
CLIP3-205ENST00000592017 PFASO15067 1338 aa16.4■□□□□ 0.22
CLIP3-205ENST00000592017 A0A0G2JMZ2 1700 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 MCCP23508 829 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 NOVP48745 357 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 CCDC96Q2M329 555 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 SNRNP48Q6IEG0 339 aaKnown RBP16.39■□□□□ 0.21
CLIP3-205ENST00000592017 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 SLC38A10Q9HBR0 1119 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 SLC5A4Q9NY91 659 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
CLIP3-205ENST00000592017 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 ZBED4O75132 1171 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 TOP1P11387 765 aaKnown RBP16.38■□□□□ 0.21
CLIP3-205ENST00000592017 COPB2P35606 906 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 SLC4A3P48751 1232 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 KCTD2Q14681 263 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 KCTD1Q719H9 257 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 IQCA1Q86XH1 822 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 GMCL1Q96IK5 515 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 TMEM47Q9BQJ4 181 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 KRT23Q9C075 422 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 PRO3102Q9H379 93 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 RAVER2Q9HCJ3 691 aaKnown RBP16.38■□□□□ 0.21
CLIP3-205ENST00000592017 ANO2Q9NQ90 1003 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 TCP11L1Q9NUJ3 509 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 RBM8AQ9Y5S9 174 aaKnown RBP16.38■□□□□ 0.21
CLIP3-205ENST00000592017 TRIOBPQ9H2D6 2365 aa16.38■□□□□ 0.21
CLIP3-205ENST00000592017 CDC45O75419 566 aa16.37■□□□□ 0.21
CLIP3-205ENST00000592017 CYP21A2P08686 494 aa16.37■□□□□ 0.21
CLIP3-205ENST00000592017 STAT2P52630 851 aa16.37■□□□□ 0.21
CLIP3-205ENST00000592017 ERICH6BQ5W0A0 696 aa16.37■□□□□ 0.21
CLIP3-205ENST00000592017 ANO1Q5XXA6 986 aa16.37■□□□□ 0.21
CLIP3-205ENST00000592017 C7orf61Q8IZ16 206 aa16.37■□□□□ 0.21
CLIP3-205ENST00000592017 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
CLIP3-205ENST00000592017 DIS3Q9Y2L1 958 aaKnown RBP16.37■□□□□ 0.21
CLIP3-205ENST00000592017 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
CLIP3-205ENST00000592017 SEPT4O43236 478 aa16.36■□□□□ 0.21
CLIP3-205ENST00000592017 MSCO60682 206 aa16.36■□□□□ 0.21
CLIP3-205ENST00000592017 TRDNQ13061 729 aa16.36■□□□□ 0.21
CLIP3-205ENST00000592017 RCSD1Q6JBY9 416 aa16.36■□□□□ 0.21
CLIP3-205ENST00000592017 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
CLIP3-205ENST00000592017 UBAC1Q9BSL1 405 aa16.36■□□□□ 0.21
CLIP3-205ENST00000592017 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms