RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 KCND1Q9NSA2 647 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 PDHBP11177 359 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 AKR1B1P15121 316 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 GTF2F1P35269 517 aaKnown RBP eCLIP22.38■■□□□ 1.178e-7■□□□□ 10.4
MBD3-209ENST00000592012 MSL1Q68DK7 614 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 CDC42EP5Q6NZY7 148 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 VSTM4Q8IW00 320 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 ZNF622Q969S3 477 aaKnown RBP eCLIP22.38■■□□□ 1.17
MBD3-209ENST00000592012 MTRQ99707 1265 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 INTS13Q9NVM9 706 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 SERPINB13Q9UIV8 391 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 IGKV6D-41A0A0C4DH26 115 aa22.37■■□□□ 1.17
MBD3-209ENST00000592012 NAPAP54920 295 aa22.37■■□□□ 1.17
MBD3-209ENST00000592012 HSP90AA4PQ58FG1 418 aa22.37■■□□□ 1.17
MBD3-209ENST00000592012 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
MBD3-209ENST00000592012 CCDC12Q8WUD4 166 aaPredicted RBP22.37■■□□□ 1.17
MBD3-209ENST00000592012 STAMQ92783 540 aa22.37■■□□□ 1.17
MBD3-209ENST00000592012 TMEM60Q9H2L4 133 aa22.37■■□□□ 1.17
MBD3-209ENST00000592012 G3V3G9 751 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 TNNT1P13805 278 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 CD44P16070 742 aaKnown RBP22.36■■□□□ 1.17
MBD3-209ENST00000592012 DCAF8Q5TAQ9 597 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 PODNQ7Z5L7 613 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 TEKT1Q969V4 418 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 RIOX1Q9H6W3 641 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 VAT1LQ9HCJ6 419 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 KCNQ5Q9NR82 932 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 TMEM232C9JQI7 657 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 CDC25AP30304 524 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 DTHD1Q6ZMT9 781 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 PIGSQ96S52 555 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 UBA5Q9GZZ9 404 aa22.36■■□□□ 1.17
MBD3-209ENST00000592012 SMCO2A6NFE2 343 aa22.35■■□□□ 1.17
MBD3-209ENST00000592012 CUL4BQ13620 913 aa22.35■■□□□ 1.17
MBD3-209ENST00000592012 CCAR2Q8N163 923 aaKnown RBP22.35■■□□□ 1.17
MBD3-209ENST00000592012 SAMSN1Q9NSI8 373 aaKnown RBP22.35■■□□□ 1.17
MBD3-209ENST00000592012 SEC63Q9UGP8 760 aaKnown RBP22.35■■□□□ 1.17
MBD3-209ENST00000592012 SWAP70Q9UH65 585 aa22.35■■□□□ 1.17
MBD3-209ENST00000592012 MYH8P13535 1937 aa22.35■■□□□ 1.17
MBD3-209ENST00000592012 CDK11BP21127 795 aaKnown RBP22.35■■□□□ 1.17
MBD3-209ENST00000592012 GNA11P29992 359 aa22.35■■□□□ 1.17
MBD3-209ENST00000592012 DBNDD1Q9H9R9 158 aa22.35■■□□□ 1.17
MBD3-209ENST00000592012 C6orf50Q9HD87 102 aa22.35■■□□□ 1.17
MBD3-209ENST00000592012 SNHG28P0DPA3 235 aa22.34■■□□□ 1.17
MBD3-209ENST00000592012 PPP1R3GB7ZBB8 358 aa22.34■■□□□ 1.17
MBD3-209ENST00000592012 SHMT1P34896 483 aa22.34■■□□□ 1.17
MBD3-209ENST00000592012 NYAP1Q6ZVC0 841 aa22.34■■□□□ 1.17
MBD3-209ENST00000592012 C2CD5Q86YS7 1000 aa22.34■■□□□ 1.17
MBD3-209ENST00000592012 LRRC47Q8N1G4 583 aaKnown RBP22.34■■□□□ 1.17
MBD3-209ENST00000592012 BLZF1Q9H2G9 400 aa22.34■■□□□ 1.17
MBD3-209ENST00000592012 ADAMTSL1Q8N6G6 1762 aa22.34■■□□□ 1.17
MBD3-209ENST00000592012 LAD1O00515 517 aa22.33■■□□□ 1.17
MBD3-209ENST00000592012 GTPBP6O43824 516 aaPredicted RBP22.33■■□□□ 1.17
MBD3-209ENST00000592012 TXLNAP40222 546 aa22.33■■□□□ 1.17
MBD3-209ENST00000592012 NFIAQ12857 509 aa22.33■■□□□ 1.17
MBD3-209ENST00000592012 KRT25Q7Z3Z0 450 aa22.33■■□□□ 1.17
MBD3-209ENST00000592012 MYO3BQ8WXR4 1341 aa22.33■■□□□ 1.17
MBD3-209ENST00000592012 RIOK3O14730 519 aaKnown RBP22.33■■□□□ 1.16
MBD3-209ENST00000592012 TTLL1O95922 423 aa22.33■■□□□ 1.16
MBD3-209ENST00000592012 CRKP46108 304 aa22.33■■□□□ 1.16
MBD3-209ENST00000592012 EIF6P56537 245 aaKnown RBP22.33■■□□□ 1.16
MBD3-209ENST00000592012 PTPN21Q16825 1174 aa22.33■■□□□ 1.16
MBD3-209ENST00000592012 SPATA1Q5VX52 437 aa22.33■■□□□ 1.16
MBD3-209ENST00000592012 CLEC10AQ8IUN9 316 aa22.33■■□□□ 1.16
MBD3-209ENST00000592012 SMYD4Q8IYR2 804 aaPredicted RBP22.33■■□□□ 1.16
MBD3-209ENST00000592012 TRMT1Q9NXH9 659 aaKnown RBP22.33■■□□□ 1.16
MBD3-209ENST00000592012 FRMPD2Q68DX3 1309 aaPredicted RBP22.33■■□□□ 1.16
MBD3-209ENST00000592012 PRPHP41219 470 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 KARSQ15046 597 aaKnown RBP22.32■■□□□ 1.16
MBD3-209ENST00000592012 ASPRV1Q53RT3 343 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 E4F1Q66K89 784 aaPredicted RBP22.32■■□□□ 1.16
MBD3-209ENST00000592012 KLHL10Q6JEL2 608 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 DISC1Q9NRI5 854 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 KCNJ6P48051 423 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 NONOQ15233 471 aaKnown RBP eCLIP22.32■■□□□ 1.16
MBD3-209ENST00000592012 SOGA3Q5TF21 947 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 ZDHHC15Q96MV8 337 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 MRIQ9BWK5 157 aa22.32■■□□□ 1.16
MBD3-209ENST00000592012 ESYT2A0FGR8 921 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 H0YIN7 160 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 TMX1Q9H3N1 280 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 STAT6P42226 847 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 STX17P56962 302 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 PTPN14Q15678 1187 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 NAALADL2Q58DX5 795 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 STRIP1Q5VSL9 837 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 STYK1Q6J9G0 422 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 ZFPM1Q8IX07 1006 aa22.31■■□□□ 1.16
MBD3-209ENST00000592012 PP2D1A8MPX8 630 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 hCG_1984214I3L0E3 225 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 NRDCO43847 1150 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 HLA-DOAP06340 250 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 TBX2Q13207 712 aaPredicted RBP22.3■■□□□ 1.16
MBD3-209ENST00000592012 NR1I3Q14994 352 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 ZNF713Q8N859 430 aaPredicted RBP22.3■■□□□ 1.16
MBD3-209ENST00000592012 CCSER1Q9C0I3 900 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 PAXBP1Q9Y5B6 917 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 SYNRGQ9UMZ2 1314 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 CCNT1O60563 726 aaKnown RBP22.3■■□□□ 1.16
MBD3-209ENST00000592012 RBM10P98175 930 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms