RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CEP290O15078 2479 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 ERICH2A1L162 156 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 HMGCRP04035 888 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 INHAP05111 366 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 FDX1P10109 184 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 FCER1AP12319 257 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 CCL5P13501 91 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 KCTD2Q14681 263 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
BRCA1-227ENST00000591849 DGKHQ86XP1 1220 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 MAP4K1Q92918 833 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 ZSCAN10Q96SZ4 725 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-227ENST00000591849 ZSWIM5Q9P217 1185 aa11.83□□□□□ -0.52
BRCA1-227ENST00000591849 RBM8AQ9Y5S9 174 aaKnown RBP11.83□□□□□ -0.52
BRCA1-227ENST00000591849 SART3Q15020 963 aaKnown RBP11.82□□□□□ -0.52
BRCA1-227ENST00000591849 MTFR1Q15390 333 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 MORN1Q5T089 497 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 IFIT1BQ5T764 474 aaKnown RBP11.82□□□□□ -0.52
BRCA1-227ENST00000591849 RNF20Q5VTR2 975 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 MFSD14CQ5VZR4 134 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 RIOX2Q8IUF8 465 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 NCOA7Q8NI08 942 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 NKX2-3Q8TAU0 364 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 MMP19Q99542 508 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 APBA2Q99767 749 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 TEX13BQ9BXU2 312 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 RAVER2Q9HCJ3 691 aaKnown RBP11.82□□□□□ -0.52
BRCA1-227ENST00000591849 ADAMTS5Q9UNA0 930 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 FRMPD2Q68DX3 1309 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-227ENST00000591849 MYH8P13535 1937 aa11.82□□□□□ -0.52
BRCA1-227ENST00000591849 ZSWIM8A7E2V4 1837 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 E7EWF7 191 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 IFIT3O14879 490 aaKnown RBP11.81□□□□□ -0.52
BRCA1-227ENST00000591849 TFRCP02786 760 aaKnown RBP11.81□□□□□ -0.52
BRCA1-227ENST00000591849 CYP21A2P08686 494 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
BRCA1-227ENST00000591849 ADORA2AP29274 412 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 CCDC174Q6PII3 467 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 PNMA1Q8ND90 353 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 UNC93B1Q9H1C4 597 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 HMX1Q9NP08 348 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-227ENST00000591849 TNKSO95271 1327 aa11.81□□□□□ -0.52
BRCA1-227ENST00000591849 MGAMO43451 1857 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
BRCA1-227ENST00000591849 PLA2G6O60733 806 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 EN2P19622 333 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-227ENST00000591849 SLC16A2P36021 539 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 NOVP48745 357 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 SNAP25P60880 206 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 GRB14Q14449 540 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 CCL14Q16627 93 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 GPATCH4Q5T3I0 446 aaKnown RBP11.8□□□□□ -0.52
BRCA1-227ENST00000591849 SYDE2Q5VT97 1194 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 TRIB2Q92519 343 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 USP6NLQ92738 828 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 LSG1Q9H089 658 aaKnown RBP11.8□□□□□ -0.52
BRCA1-227ENST00000591849 SLC38A10Q9HBR0 1119 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 FBXO40Q9UH90 709 aa11.8□□□□□ -0.52
BRCA1-227ENST00000591849 GJB1P08034 283 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 ALAS1P13196 640 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 CNGA1P29973 690 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 OAZ1P54368 228 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 WTAPQ15007 396 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 TMEM67Q5HYA8 995 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 CREB3L3Q68CJ9 461 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 TTBK2Q6IQ55 1244 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 ANKRD35Q8N283 1001 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 ENAHQ8N8S7 591 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-227ENST00000591849 CHST13Q8NET6 341 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 REPS2Q8NFH8 660 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 DEFB118Q96PH6 123 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.79□□□□□ -0.52
BRCA1-227ENST00000591849 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 ZNF214Q9UL59 606 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-227ENST00000591849 PRR12Q9ULL5 1215 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 RPTORQ8N122 1335 aa11.79□□□□□ -0.52
BRCA1-227ENST00000591849 SLC27A2O14975 620 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 ATP2A1O14983 1001 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 PGK2P07205 417 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
BRCA1-227ENST00000591849 GOLGA8HP0CJ92 632 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 PDHBP11177 359 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
BRCA1-227ENST00000591849 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 TRIM32Q13049 653 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 ASPRV1Q53RT3 343 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 NFXL1Q6ZNB6 911 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 RASGRP2Q7LDG7 609 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 AGBL1Q96MI9 1066 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
BRCA1-227ENST00000591849 CCPG1Q9ULG6 757 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms