RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 ZKSCAN4Q969J2 545 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 SPATA32Q96LK8 384 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 WRNIP1Q96S55 665 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 VCPKMTQ9H867 229 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 ELP1O95163 1332 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 SCN4AP35499 1836 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 IQCA1LA6NCM1 817 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 KRT2P35908 639 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 NLRP5P59047 1200 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 ZYXQ15942 572 aaKnown RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 RCOR1Q9UKL0 485 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 PPP1R11O60927 126 aaPredicted RBP13.1□□□□□ -0.31
TUBD1-211ENST00000591548 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
TUBD1-211ENST00000591548 PRKG1Q13976 671 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 KLHL40Q2TBA0 621 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 EARS2Q5JPH6 523 aaKnown RBP13.1□□□□□ -0.31
TUBD1-211ENST00000591548 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 RTEL1Q9NZ71 1219 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
TUBD1-211ENST00000591548 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 ZBTB5O15062 677 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 PTPRAP18433 802 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 CALML3P27482 149 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-211ENST00000591548 EAPPQ56P03 285 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-211ENST00000591548 NOM1Q5C9Z4 860 aaKnown RBP13.09□□□□□ -0.31
TUBD1-211ENST00000591548 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-211ENST00000591548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
TUBD1-211ENST00000591548 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 PCDHA4Q9UN74 947 aa13.09□□□□□ -0.31
TUBD1-211ENST00000591548 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 M0R2N6 131 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 NASPP49321 788 aaPredicted RBP13.08□□□□□ -0.32
TUBD1-211ENST00000591548 NAPAP54920 295 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 UBE2HP62256 183 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 SYDE2Q5VT97 1194 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 ANO1Q5XXA6 986 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
TUBD1-211ENST00000591548 BLIDQ8IZY5 108 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
TUBD1-211ENST00000591548 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 LINC00301Q8NCQ3 95 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 COA7Q96BR5 231 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 FEZ1Q99689 392 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 WDR18Q9BV38 432 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 BRMS1Q9HCU9 246 aa13.08□□□□□ -0.32
TUBD1-211ENST00000591548 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 POTEIP0CG38 1075 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 DGKZQ13574 1117 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 CDC37Q16543 378 aaPredicted RBP13.07□□□□□ -0.32
TUBD1-211ENST00000591548 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
TUBD1-211ENST00000591548 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
TUBD1-211ENST00000591548 CCDC12Q8WUD4 166 aaPredicted RBP13.07□□□□□ -0.32
TUBD1-211ENST00000591548 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 PICK1Q9NRD5 415 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 ESYT2A0FGR8 921 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 YEATS4O95619 227 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 MBD3O95983 291 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 STAT2P52630 851 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 SNAP25P60880 206 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 SPP2Q13103 211 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
TUBD1-211ENST00000591548 MTMR2Q13614 643 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 PTPAQ15257 358 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
TUBD1-211ENST00000591548 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 RILPL1Q5EBL4 403 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 PCDHA6Q9UN73 950 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 PCDHA8Q9Y5H6 950 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
TUBD1-211ENST00000591548 PAPPA2Q9BXP8 1791 aa13.06□□□□□ -0.32
TUBD1-211ENST00000591548 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-211ENST00000591548 PLA2G6O60733 806 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms