RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 NUP88Q99567 741 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-211ENST00000591547 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
RETREG3-211ENST00000591547 NKX2-4Q9H2Z4 354 aa11.87□□□□□ -0.51
RETREG3-211ENST00000591547 ARHGEF10LQ9HCE6 1279 aa11.87□□□□□ -0.51
RETREG3-211ENST00000591547 IL1RAPL2Q9NP60 686 aa11.87□□□□□ -0.51
RETREG3-211ENST00000591547 CXXC1Q9P0U4 656 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-211ENST00000591547 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-211ENST00000591547 ADAMTS5Q9UNA0 930 aa11.87□□□□□ -0.51
RETREG3-211ENST00000591547 RIPK3Q9Y572 518 aa11.87□□□□□ -0.51
RETREG3-211ENST00000591547 TCRBV5S4A2TA0A5A2 114 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 VWA5AO00534 786 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 WDR46O15213 610 aaKnown RBP11.86□□□□□ -0.51
RETREG3-211ENST00000591547 SLC25A27O95847 323 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 PTGS1P23219 599 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 CYP2C18P33260 490 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 RASIP1Q5U651 963 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 CERS3Q8IU89 383 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 ATXN2LQ8WWM7 1075 aaKnown RBP11.86□□□□□ -0.51
RETREG3-211ENST00000591547 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 TOX2Q96NM4 488 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 UHRF1Q96T88 793 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-211ENST00000591547 TSEN34Q9BSV6 310 aaKnown RBP11.86□□□□□ -0.51
RETREG3-211ENST00000591547 THEGQ9P2T0 379 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 NRBP1Q9UHY1 535 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-211ENST00000591547 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 YBX2Q9Y2T7 364 aaKnown RBP11.86□□□□□ -0.51
RETREG3-211ENST00000591547 SUPT16HQ9Y5B9 1047 aaKnown RBP11.86□□□□□ -0.51
RETREG3-211ENST00000591547 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
RETREG3-211ENST00000591547 MYO9BQ13459 2157 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 GOLIM4O00461 696 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 IGSF3O75054 1194 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 ASGR1P07306 291 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 MYOGP15173 224 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 CDK8P49336 464 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 CDK7P50613 346 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 STK11IPQ8N1F8 1099 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 DNAJC2Q99543 621 aaKnown RBP11.85□□□□□ -0.51
RETREG3-211ENST00000591547 FAM184BQ9ULE4 1060 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 PPP1R9AQ9ULJ8 1098 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 CNPY2Q9Y2B0 182 aa11.85□□□□□ -0.51
RETREG3-211ENST00000591547 ROBO3Q96MS0 1386 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 APBB1O00213 710 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 MBD4O95243 580 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-211ENST00000591547 PLA2G5P39877 138 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 RABGGTBP53611 331 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 MRPS5P82675 430 aaKnown RBP11.84□□□□□ -0.51
RETREG3-211ENST00000591547 BEX3Q00994 111 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 TFF2Q03403 129 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 PPIGQ13427 754 aaKnown RBP eCLIP11.84□□□□□ -0.511e-12■□□□□ 8.7
RETREG3-211ENST00000591547 AKNAD1Q5T1N1 836 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 SWAP70Q9UH65 585 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 DIS3Q9Y2L1 958 aaKnown RBP11.84□□□□□ -0.51
RETREG3-211ENST00000591547 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
RETREG3-211ENST00000591547 BDP1A6H8Y1 2624 aa11.84□□□□□ -0.51
RETREG3-211ENST00000591547 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 USP17L12C9JPN9 530 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 USP17L21D6R901 530 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 RBAK-RBAKDNI3L0D1 243 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 RFXAPO00287 272 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 CTAGE5O15320 804 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 ACVR2BQ13705 512 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
RETREG3-211ENST00000591547 FAM126BQ8IXS8 530 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 FAM122AQ96E09 287 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 DDX11Q96FC9 970 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 FGD4Q96M96 766 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 GLT1D1Q96MS3 346 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 CRBNQ96SW2 442 aa11.83□□□□□ -0.52
RETREG3-211ENST00000591547 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.83□□□□□ -0.52
RETREG3-211ENST00000591547 DNAJC25-GNG10A0A024R161 153 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-211ENST00000591547 ARVCFO00192 962 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 DUSP11O75319 330 aaKnown RBP11.82□□□□□ -0.52
RETREG3-211ENST00000591547 KCNQ1P51787 676 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 CCL23P55773 120 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 CCDC144BQ3MJ40 725 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 GNASQ5JWF2 1037 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 C12orf60Q5U649 245 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 CEP85Q6P2H3 762 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 OTOP2Q7RTS6 562 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 TMEM199Q8N511 208 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 SH2D4AQ9H788 454 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 IL23AQ9NPF7 189 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-211ENST00000591547 ELP1O95163 1332 aa11.82□□□□□ -0.52
RETREG3-211ENST00000591547 A0A0U1RQG5 324 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-211ENST00000591547 BMP1P13497 986 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 TTF1Q15361 905 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-211ENST00000591547 TMEM63BQ5T3F8 832 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 PSRC1Q6PGN9 363 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-211ENST00000591547 MAMDC4Q6UXC1 1216 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 C16orf86Q6ZW13 317 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 HERVK_113Q902F9 699 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms