RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 SPATA31C1P0DKV0 1188 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 PLCG1P19174 1290 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 GRIK4Q16099 956 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 LRRFIP1Q32MZ4 808 aaKnown RBP10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 DYMQ7RTS9 669 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 KRT28Q7Z3Y7 464 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 OR6P1Q8NGX9 317 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 NACC1Q96RE7 527 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 TRIM55Q9BYV6 548 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 PNNQ9H307 717 aaKnown RBP10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 ATXN3LQ9H3M9 355 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 EHMT1Q9H9B1 1298 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 ZNRF3Q9ULT6 936 aa10.09□□□□□ -0.79
NEDD4L-230ENST00000590638 NPHP3Q7Z494 1330 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 SYNGAP1Q96PV0 1343 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 MARF1Q9Y4F3 1742 aaKnown RBP10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 SART1O43290 800 aaKnown RBP10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 PGRP06401 933 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 U2AF1L5P0DN76 240 aaPredicted RBP10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 FBLN1P23142 703 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 ETFBP38117 255 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 ERVK-24P63145 666 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 U2AF1Q01081 240 aaKnown RBP eCLIP10.08□□□□□ -0.85e-7■■■■□ 23
NEDD4L-230ENST00000590638 TNNI3KQ59H18 835 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 PPM1JQ5JR12 505 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 CYFIP1Q7L576 1253 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 HIF3AQ9Y2N7 669 aa10.08□□□□□ -0.8
NEDD4L-230ENST00000590638 TRPM3Q9HCF6 1732 aaPredicted RBP10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 U2SURPO15042 1029 aaKnown RBP10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 TMPRSS2O15393 492 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 ATE1O95260 518 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 ADH5P11766 374 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 GRK4P32298 578 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 RBL2Q08999 1139 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 RRS1Q15050 365 aaKnown RBP10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 ANKRD34AQ69YU3 496 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 ANKS3Q6ZW76 656 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 CDC37L1Q7L3B6 337 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 AGGF1Q8N302 714 aaeCLIP10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 KCNH5Q8NCM2 988 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 RUNDC1Q96C34 613 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 SUGCTQ9HAC7 445 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 SSU72Q9NP77 194 aaKnown RBP10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 PRKAG3Q9UGI9 489 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 PPP1R9AQ9ULJ8 1098 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 CORINQ9Y5Q5 1042 aa10.07□□□□□ -0.8
NEDD4L-230ENST00000590638 SBNO1A3KN83 1393 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 RNGTTO60942 597 aaKnown RBP10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 SELPP16109 830 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 SOX4Q06945 474 aaPredicted RBP10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 SHDQ96IW2 340 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 CEP41Q9BYV8 373 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 LNPKQ9C0E8 428 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 AKTIPQ9H8T0 292 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 CRIM1Q9NZV1 1036 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 REV1Q9UBZ9 1251 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 KLHL3Q9UH77 587 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
NEDD4L-230ENST00000590638 C9orf172C9J069 976 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 APAF1O14727 1248 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 FANCGO15287 622 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 GAS2O43903 313 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 GLB1P16278 677 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 GIPRP48546 466 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 AMPHP49418 695 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 NRG1Q02297 640 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 CCDC146Q8IYE0 955 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 ZNF507Q8TCN5 953 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 WNT10AQ9GZT5 417 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 ALS2Q96Q42 1657 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
NEDD4L-230ENST00000590638 FLT4P35916 1363 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 NEFMP07197 916 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 DRD2P14416 443 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 IL13P35225 146 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 ASPAP45381 313 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 PPP2R5EQ16537 467 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 ZBTB37Q5TC79 503 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 BRINP3Q76B58 766 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 LSRQ86X29 649 aaPredicted RBP10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 ADAM30Q9UKF2 790 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
NEDD4L-230ENST00000590638 SLIT3O75094 1523 aa10.03□□□□□ -0.8
NEDD4L-230ENST00000590638 ALX3O95076 343 aa10.03□□□□□ -0.8
NEDD4L-230ENST00000590638 USP11P51784 963 aa10.03□□□□□ -0.8
NEDD4L-230ENST00000590638 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
NEDD4L-230ENST00000590638 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
NEDD4L-230ENST00000590638 KCT2Q8NC54 265 aa10.03□□□□□ -0.8
NEDD4L-230ENST00000590638 RNF214Q8ND24 703 aa10.03□□□□□ -0.8
NEDD4L-230ENST00000590638 HNRNPLLQ8WVV9 542 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms