RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 NOP58Q9Y2X3 529 aaKnown RBP15.49■□□□□ 0.07
PRKCSH-210ENST00000589990 VWA5AO00534 786 aa15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 WDR46O15213 610 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 STAT3P40763 770 aa15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 NUP133Q8WUM0 1156 aa15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 CRNKL1Q9BZJ0 848 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 CNPY2Q9Y2B0 182 aa15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 RIPK3Q9Y572 518 aa15.48■□□□□ 0.07
PRKCSH-210ENST00000589990 ZNF532Q9HCE3 1301 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 MOXD2PA6NHM9 499 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 CHGBP05060 677 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 ASGR1P07306 291 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 BMP1P13497 986 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 EEF2P13639 858 aaKnown RBP15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 MYOGP15173 224 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 PTGS1P23219 599 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 KCNQ1P51787 676 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 RABGGTBP53611 331 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 SLC9C2Q5TAH2 1124 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 FAM126BQ8IXS8 530 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 MICALL1Q8N3F8 863 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 NUP88Q99567 741 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 ARMT1Q9H993 441 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 ARHGEF10LQ9HCE6 1279 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
PRKCSH-210ENST00000589990 APBB1O00213 710 aa15.46■□□□□ 0.07
PRKCSH-210ENST00000589990 CTAGE5O15320 804 aa15.46■□□□□ 0.07
PRKCSH-210ENST00000589990 C6orf222P0C671 652 aaPredicted RBP15.46■□□□□ 0.07
PRKCSH-210ENST00000589990 AACSQ86V21 672 aa15.46■□□□□ 0.07
PRKCSH-210ENST00000589990 FGD4Q96M96 766 aa15.46■□□□□ 0.07
PRKCSH-210ENST00000589990 GLT1D1Q96MS3 346 aa15.46■□□□□ 0.07
PRKCSH-210ENST00000589990 FAM184BQ9ULE4 1060 aa15.46■□□□□ 0.07
PRKCSH-210ENST00000589990 ELP1O95163 1332 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 DNAJC25-GNG10A0A024R161 153 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 ARVCFO00192 962 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 RAD21O60216 631 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 DUSP11O75319 330 aaKnown RBP15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 CDK8P49336 464 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 PSRC1Q6PGN9 363 aaPredicted RBP15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 OTOP2Q7RTS6 562 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 TMEM199Q8N511 208 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 HERVK_113Q902F9 699 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 VWCEQ96DN2 955 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 EPHX3Q9H6B9 360 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 MSRAQ9UJ68 235 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 EXOC6BQ9Y2D4 811 aa15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 PRRC2BQ5JSZ5 2229 aaKnown RBP15.45■□□□□ 0.06
PRKCSH-210ENST00000589990 RFXAPO00287 272 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 IPO8O15397 1037 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 SLC4A3P48751 1232 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 BEX3Q00994 111 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 CCDC144BQ3MJ40 725 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 MAMDC4Q6UXC1 1216 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 IL1RAPL2Q9NP60 686 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 IL23AQ9NPF7 189 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 SWAP70Q9UH65 585 aa15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 DDX49Q9Y6V7 483 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-210ENST00000589990 SYNGAP1Q96PV0 1343 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 A0A0U1RQG5 324 aaPredicted RBP15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 GOLIM4O00461 696 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 CD4P01730 458 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 ACVR2BQ13705 512 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 RAB30Q15771 203 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 IL27Q8NEV9 243 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 UPF3AQ9H1J1 476 aaKnown RBP15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 SH2D4AQ9H788 454 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 SLC28A3Q9HAS3 691 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 ASTN1O14525 1302 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 MROH7Q68CQ1 1323 aa15.43■□□□□ 0.06
PRKCSH-210ENST00000589990 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 MBD4O95243 580 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 RLBP1P12271 317 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 CCL23P55773 120 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 GJA9P57773 515 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 GNASQ5JWF2 1037 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 C12orf60Q5U649 245 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 KRT40Q6A162 431 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 KHSRPQ92945 711 aaKnown RBP eCLIP15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 DDX11Q96FC9 970 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 DNAJC2Q99543 621 aaKnown RBP15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 LRFN3Q9BTN0 628 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 KATNBL1Q9H079 304 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 WNT8AQ9H1J5 351 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 GREB1LQ9C091 1923 aaPredicted RBP15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 GRIN2DO15399 1336 aa15.42■□□□□ 0.06
PRKCSH-210ENST00000589990 USP17L12C9JPN9 530 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 USP17L21D6R901 530 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 FGBP02675 491 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 DIEXFQ68CQ4 756 aaKnown RBP15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 CCDC174Q6PII3 467 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 CXCL17Q6UXB2 119 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms