RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 OSBPP22059 807 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 SLC16A2P36021 539 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 FAM43AQ8N2R8 423 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 SLF1Q9BQI6 1058 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 UBA5Q9GZZ9 404 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 FBXO28Q9NVF7 368 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 TM4SF4P48230 202 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 IRX3P78415 501 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 COG2Q14746 738 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 CCDC83Q8IWF9 413 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 REM2Q8IYK8 340 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 PRPF38AQ8NAV1 312 aaKnown RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 ASCC2Q9H1I8 757 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-211ENST00000589753 CPVLQ9H3G5 476 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 PNMA3Q9UL41 463 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 PPP1R9AQ9ULJ8 1098 aa17.64■□□□□ 0.41
ATG4D-211ENST00000589753 IGF2BP3O00425 579 aaKnown RBP eCLIP17.63■□□□□ 0.41
ATG4D-211ENST00000589753 MAP2K2P36507 400 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 ANP32AP39687 249 aaKnown RBP17.63■□□□□ 0.41
ATG4D-211ENST00000589753 ST3GAL1Q11201 340 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 NTRK3Q16288 839 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 OTUD7BQ6GQQ9 843 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 NBPF11Q86T75 865 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 IFNL1Q8IU54 200 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 CCDC82Q8N4S0 544 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 KIFC2Q96AC6 838 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 SPZ1Q9BXG8 430 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 RIOX1Q9H6W3 641 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 ZCCHC17Q9NP64 241 aaKnown RBP17.63■□□□□ 0.41
ATG4D-211ENST00000589753 HOXC10Q9NYD6 342 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 PRR12Q9ULL5 1215 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 RBM19Q9Y4C8 960 aaKnown RBP17.63■□□□□ 0.41
ATG4D-211ENST00000589753 MYPNQ86TC9 1320 aa17.63■□□□□ 0.41
ATG4D-211ENST00000589753 CYTH3O43739 400 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 CDKL5O76039 1030 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 IFNAR1P17181 557 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 DSG3P32926 999 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 FUT2Q10981 343 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 BECN1Q14457 450 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 SLC35G1Q2M3R5 365 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 ADGRF4Q8IZF3 695 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 P2RX7Q99572 595 aaKnown RBP17.62■□□□□ 0.41
ATG4D-211ENST00000589753 VAT1LQ9HCJ6 419 aa17.62■□□□□ 0.41
ATG4D-211ENST00000589753 PARP14Q460N5 1801 aa17.61■□□□□ 0.41
ATG4D-211ENST00000589753 SPDYE16A6NNV3 312 aaPredicted RBP17.61■□□□□ 0.41
ATG4D-211ENST00000589753 ATG4CQ96DT6 458 aa17.61■□□□□ 0.41
ATG4D-211ENST00000589753 PARK7Q99497 189 aaKnown RBP17.61■□□□□ 0.41
ATG4D-211ENST00000589753 JMJD4Q9H9V9 463 aa17.61■□□□□ 0.41
ATG4D-211ENST00000589753 CNTNAP5Q8WYK1 1306 aa17.61■□□□□ 0.41
ATG4D-211ENST00000589753 THSD7BQ9C0I4 1608 aa17.61■□□□□ 0.41
ATG4D-211ENST00000589753 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 FDX1P10109 184 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 CYP2C8P10632 490 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 HERVK_113P62684 666 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 CUL4AQ13619 759 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
ATG4D-211ENST00000589753 PHKBQ93100 1093 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 RRP36Q96EU6 259 aaKnown RBP17.6■□□□□ 0.41
ATG4D-211ENST00000589753 LLPHQ9BRT6 129 aaKnown RBP17.6■□□□□ 0.41
ATG4D-211ENST00000589753 SLC26A6Q9BXS9 759 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-211ENST00000589753 ADAMTS5Q9UNA0 930 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 CTDP1Q9Y5B0 961 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-211ENST00000589753 RLFQ13129 1914 aa17.6■□□□□ 0.41
ATG4D-211ENST00000589753 VWA5AO00534 786 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 PRPF3O43395 683 aaKnown RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 ZBED4O75132 1171 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 PPFIA3O75145 1194 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 ALDH1A1P00352 501 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 AKAP17AQ02040 695 aaKnown RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 TAF1CQ15572 869 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 CDC37Q16543 378 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 LBX2Q6XYB7 198 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 TRIM22Q8IYM9 498 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 GTF3C2Q8WUA4 911 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 PIBF1Q8WXW3 757 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 MTMR8Q96EF0 704 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 PIGSQ96S52 555 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 RANBP17Q9H2T7 1088 aaKnown RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 SLC38A10Q9HBR0 1119 aa17.59■□□□□ 0.41
ATG4D-211ENST00000589753 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 V9GY48 417 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-211ENST00000589753 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.4
ATG4D-211ENST00000589753 ZBTB5O15062 677 aa17.58■□□□□ 0.4
ATG4D-211ENST00000589753 SNAP25P60880 206 aa17.58■□□□□ 0.4
ATG4D-211ENST00000589753 MB21D1Q8N884 522 aa17.58■□□□□ 0.4
ATG4D-211ENST00000589753 STK36Q9NRP7 1315 aa17.57■□□□□ 0.4
ATG4D-211ENST00000589753 PNMA6FA0A0J9YX94 578 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms