RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ANKRD18BA2A2Z9 1011 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 E9PSI1 815 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 PSMD14O00487 310 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 PLIN1O60240 522 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 EHHADHQ08426 723 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 KCNA1Q09470 495 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 C8orf34Q49A92 452 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 USP50Q70EL3 339 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-219ENST00000589349 TTLL11Q8NHH1 800 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 ELP3Q9H9T3 547 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 ABI2Q9NYB9 513 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-219ENST00000589349 TAF1P21675 1872 aa10.36□□□□□ -0.75
DNMT1-219ENST00000589349 XDHP47989 1333 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 YDJCA8MPS7 323 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
DNMT1-219ENST00000589349 FZD6O60353 706 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 LILRB5O75023 590 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 CPB1P15086 417 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 IFIT5Q13325 482 aaKnown RBP10.35□□□□□ -0.75
DNMT1-219ENST00000589349 TBC1D10BQ4KMP7 808 aaPredicted RBP10.35□□□□□ -0.75
DNMT1-219ENST00000589349 PSAPL1Q6NUJ1 521 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 XKR5Q6UX68 686 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 OR13H1Q8NG92 308 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 KCNQ5Q9NR82 932 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 FRRS1LQ9P0K9 344 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 NAGPAQ9UK23 515 aa10.35□□□□□ -0.75
DNMT1-219ENST00000589349 LAMB2P55268 1798 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 SHTN1A0MZ66 631 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 SPDYE3A6NKU9 549 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 ZBTB42B2RXF5 422 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 TRAF5O00463 557 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 MLLT1Q03111 559 aaPredicted RBP10.34□□□□□ -0.75
DNMT1-219ENST00000589349 CCDC57Q2TAC2 916 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 C20orf204Q6ZNR8 217 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 ALYREFQ86V81 257 aaKnown RBP10.34□□□□□ -0.75
DNMT1-219ENST00000589349 SRCIN1Q9C0H9 1055 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 RBSNQ9H1K0 784 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 JPH1Q9HDC5 661 aaPredicted RBP10.34□□□□□ -0.75
DNMT1-219ENST00000589349 CNNM1Q9NRU3 951 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 BSDC1Q9NW68 430 aaPredicted RBP10.34□□□□□ -0.75
DNMT1-219ENST00000589349 MINPP1Q9UNW1 487 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 COL4A5P29400 1685 aa10.34□□□□□ -0.75
DNMT1-219ENST00000589349 DDX60Q8IY21 1712 aaKnown RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 RGS9O75916 674 aaPredicted RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 CELF2O95319 508 aaKnown RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 EIF2AK2P19525 551 aaKnown RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 CCT4P50991 539 aaKnown RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 FMR1Q06787 632 aaKnown RBP eCLIP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 DEFB115Q30KQ5 88 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 BEND3Q5T5X7 828 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 ELMSAN1Q6PJG2 1045 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 LMBR1LQ6UX01 489 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 DCPSQ96C86 337 aaKnown RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 NSUN5Q96P11 429 aaKnown RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 GLIS2Q9BZE0 524 aaPredicted RBP10.33□□□□□ -0.76
DNMT1-219ENST00000589349 ANKRD2Q9GZV1 360 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 SMC4Q9NTJ3 1288 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 SCN4AP35499 1836 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
DNMT1-219ENST00000589349 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 GRM8O00222 908 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 NDUFB5O43674 189 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 GHRHP01286 108 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 PDIA4P13667 645 aaKnown RBP10.32□□□□□ -0.76
DNMT1-219ENST00000589349 HYAL2Q12891 473 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
DNMT1-219ENST00000589349 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 TMEM151AQ8N4L1 468 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 NUDT8Q8WV74 236 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 PODXL2Q9NZ53 605 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 TMEM63CQ9P1W3 806 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 PASKQ96RG2 1323 aa10.32□□□□□ -0.76
DNMT1-219ENST00000589349 WTIPA6NIX2 430 aaPredicted RBP10.31□□□□□ -0.76
DNMT1-219ENST00000589349 SOWAHDA6NJG2 315 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 TAF5LO75529 589 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 HSPA1AP0DMV8 641 aaKnown RBP10.31□□□□□ -0.76
DNMT1-219ENST00000589349 HSPA1BP0DMV9 641 aaKnown RBP10.31□□□□□ -0.76
DNMT1-219ENST00000589349 RPS12P25398 132 aaKnown RBP10.31□□□□□ -0.76
DNMT1-219ENST00000589349 ARHGAP4P98171 946 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 SLFN5Q08AF3 891 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 KIF4BQ2VIQ3 1234 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 PERM1Q5SV97 790 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 LDHAL6AQ6ZMR3 332 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 HFE2Q6ZVN8 426 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 CDC37L1Q7L3B6 337 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 GJD3Q8N144 294 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 LEMD3Q9Y2U8 911 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 ZNF804BA4D1E1 1349 aa10.31□□□□□ -0.76
DNMT1-219ENST00000589349 ALDH1L1O75891 902 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 GDF11O95390 407 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 GSK3AP49840 483 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 CHRNDQ07001 517 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 ECM1Q16610 540 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 KRT26Q7Z3Y9 468 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 SSH1Q8WYL5 1049 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 TTC9Q92623 222 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 DPF2Q92785 391 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 SPACA7Q96KW9 195 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 LPIN3Q9BQK8 851 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms