RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 STAT2P52630 851 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 INHBEP58166 350 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 FUT2Q10981 343 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 SAMD1Q6SPF0 538 aaPredicted RBP23.31■■□□□ 1.32
DNMT1-216ENST00000588952 GTF3C6Q969F1 213 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 TMX3Q96JJ7 454 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 P2RX7Q99572 595 aaKnown RBP23.31■■□□□ 1.32
DNMT1-216ENST00000588952 SLF1Q9BQI6 1058 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 PPP1R9AQ9ULJ8 1098 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 SLC45A1Q9Y2W3 748 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 SPDYE16A6NNV3 312 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-216ENST00000588952 DSG3P32926 999 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 MAP2K2P36507 400 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 MCM2P49736 904 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 SNAP25P60880 206 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 IKQ13123 557 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-216ENST00000588952 NTRK3Q16288 839 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 SYDE2Q5VT97 1194 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 KIFC2Q96AC6 838 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 ATG4CQ96DT6 458 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 ZSCAN31Q96LW9 406 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-216ENST00000588952 RBM28Q9NW13 759 aaKnown RBP23.3■■□□□ 1.32
DNMT1-216ENST00000588952 PRR12Q9ULL5 1215 aa23.3■■□□□ 1.32
DNMT1-216ENST00000588952 A0A0G2JMZ2 1700 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 PPFIA3O75145 1194 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 IRX3P78415 501 aaPredicted RBP23.29■■□□□ 1.32
DNMT1-216ENST00000588952 PABPC4Q13310 644 aaKnown RBP eCLIP23.29■■□□□ 1.32
DNMT1-216ENST00000588952 FAM160B2Q86V87 743 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 CCDC83Q8IWF9 413 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 ADGRF4Q8IZF3 695 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 CCDC82Q8N4S0 544 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 DNAJC5GQ8N7S2 189 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 CNTNAP5Q8WYK1 1306 aa23.29■■□□□ 1.32
DNMT1-216ENST00000588952 PEX10O60683 326 aa23.28■■□□□ 1.32
DNMT1-216ENST00000588952 CTDNEP1O95476 244 aa23.28■■□□□ 1.32
DNMT1-216ENST00000588952 OSBPP22059 807 aa23.28■■□□□ 1.32
DNMT1-216ENST00000588952 COG2Q14746 738 aa23.28■■□□□ 1.32
DNMT1-216ENST00000588952 CHURC1Q8WUH1 139 aa23.28■■□□□ 1.32
DNMT1-216ENST00000588952 RIOX1Q9H6W3 641 aa23.28■■□□□ 1.32
DNMT1-216ENST00000588952 JMJD4Q9H9V9 463 aa23.28■■□□□ 1.32
DNMT1-216ENST00000588952 SH2B1Q9NRF2 756 aaPredicted RBP23.28■■□□□ 1.32
DNMT1-216ENST00000588952 GNAQP50148 359 aa23.27■■□□□ 1.32
DNMT1-216ENST00000588952 HERVK_113P62684 666 aa23.27■■□□□ 1.32
DNMT1-216ENST00000588952 PRPF38AQ8NAV1 312 aaKnown RBP23.27■■□□□ 1.32
DNMT1-216ENST00000588952 SPZ1Q9BXG8 430 aa23.27■■□□□ 1.32
DNMT1-216ENST00000588952 VAT1LQ9HCJ6 419 aa23.27■■□□□ 1.32
DNMT1-216ENST00000588952 ZCCHC17Q9NP64 241 aaKnown RBP23.27■■□□□ 1.32
DNMT1-216ENST00000588952 ADAMTS5Q9UNA0 930 aa23.27■■□□□ 1.32
DNMT1-216ENST00000588952 MYPNQ86TC9 1320 aa23.27■■□□□ 1.32
DNMT1-216ENST00000588952 ADGRA2Q96PE1 1338 aa23.27■■□□□ 1.32
DNMT1-216ENST00000588952 CCDC196A0A1B0GTZ2 297 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 K7ELQ4 463 aaPredicted RBP23.26■■□□□ 1.31
DNMT1-216ENST00000588952 PPP2R5BQ15173 497 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 REPS2Q8NFH8 660 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 PIBF1Q8WXW3 757 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 PHKBQ93100 1093 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 MTMR8Q96EF0 704 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 LZTS2Q9BRK4 669 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 PNMA3Q9UL41 463 aa23.26■■□□□ 1.31
DNMT1-216ENST00000588952 BAZ2BQ9UIF8 2168 aaKnown RBP23.25■■□□□ 1.31
DNMT1-216ENST00000588952 COL11A1P12107 1806 aaPredicted RBP23.25■■□□□ 1.31
DNMT1-216ENST00000588952 hCG_1642624A0A1W2PR95 340 aa23.25■■□□□ 1.31
DNMT1-216ENST00000588952 VWA5AO00534 786 aa23.25■■□□□ 1.31
DNMT1-216ENST00000588952 CNMDO75829 334 aa23.25■■□□□ 1.31
DNMT1-216ENST00000588952 TAL1P17542 331 aaPredicted RBP23.25■■□□□ 1.31
DNMT1-216ENST00000588952 TAF1CQ15572 869 aaPredicted RBP23.25■■□□□ 1.31
DNMT1-216ENST00000588952 LBX2Q6XYB7 198 aa23.25■■□□□ 1.31
DNMT1-216ENST00000588952 REM2Q8IYK8 340 aaPredicted RBP23.25■■□□□ 1.31
DNMT1-216ENST00000588952 PARK7Q99497 189 aaKnown RBP23.25■■□□□ 1.31
DNMT1-216ENST00000588952 RANBP17Q9H2T7 1088 aaKnown RBP23.25■■□□□ 1.31
DNMT1-216ENST00000588952 HOXC10Q9NYD6 342 aa23.25■■□□□ 1.31
DNMT1-216ENST00000588952 DHX16O60231 1041 aaKnown RBP23.24■■□□□ 1.31
DNMT1-216ENST00000588952 JAK2O60674 1132 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 IFNAR1P17181 557 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 SMARCA1P28370 1054 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 HSCBQ8IWL3 235 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 NSUN7Q8NE18 718 aaKnown RBP23.24■■□□□ 1.31
DNMT1-216ENST00000588952 PIGSQ96S52 555 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 R3HDMLQ9H3Y0 253 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 SLC38A10Q9HBR0 1119 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 TXNRD2Q9NNW7 524 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 BTBD7Q9P203 1132 aa23.24■■□□□ 1.31
DNMT1-216ENST00000588952 CRHR2Q13324 411 aa23.23■■□□□ 1.31
DNMT1-216ENST00000588952 CUL4AQ13619 759 aa23.23■■□□□ 1.31
DNMT1-216ENST00000588952 CDC37Q16543 378 aaPredicted RBP23.23■■□□□ 1.31
DNMT1-216ENST00000588952 OTUD7BQ6GQQ9 843 aa23.23■■□□□ 1.31
DNMT1-216ENST00000588952 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
DNMT1-216ENST00000588952 RBPJLQ9UBG7 517 aa23.23■■□□□ 1.31
DNMT1-216ENST00000588952 ZNF536O15090 1300 aa23.23■■□□□ 1.31
DNMT1-216ENST00000588952 CPLX1O14810 134 aa23.22■■□□□ 1.31
DNMT1-216ENST00000588952 PPP1R11O60927 126 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-216ENST00000588952 TMEM132BQ14DG7 1078 aa23.22■■□□□ 1.31
DNMT1-216ENST00000588952 QRICH1Q2TAL8 776 aa23.22■■□□□ 1.31
DNMT1-216ENST00000588952 CCDC174Q6PII3 467 aa23.22■■□□□ 1.31
DNMT1-216ENST00000588952 SMCR8Q8TEV9 937 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-216ENST00000588952 SLC26A6Q9BXS9 759 aa23.22■■□□□ 1.31
DNMT1-216ENST00000588952 RNF186Q9NXI6 227 aa23.22■■□□□ 1.31
DNMT1-216ENST00000588952 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
DNMT1-216ENST00000588952 PTPDC1A2A3K4 754 aa23.21■■□□□ 1.31
DNMT1-216ENST00000588952 CA12O43570 354 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms