RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 TRAK2O60296 914 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 SNHG28P0DPA3 235 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 SLC16A2P36021 539 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 MRE11P49959 708 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 IQCA1Q86XH1 822 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 SPATC1LQ9H0A9 340 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 GOLGA8HP0CJ92 632 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 FLT3LGP49771 235 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 IGDCC4Q8TDY8 1250 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 KCNB2Q92953 911 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 LRRC2Q9BYS8 371 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 GPCPD1Q9NPB8 672 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 RIPK3Q9Y572 518 aa20.54■□□□□ 0.88
DNMT1-215ENST00000588913 CPA1P15085 419 aa20.53■□□□□ 0.88
DNMT1-215ENST00000588913 CCDC96Q2M329 555 aa20.53■□□□□ 0.88
DNMT1-215ENST00000588913 GPR142Q7Z601 462 aa20.53■□□□□ 0.88
DNMT1-215ENST00000588913 RALYLQ86SE5 291 aaKnown RBP20.53■□□□□ 0.88
DNMT1-215ENST00000588913 GTF3C2Q8WUA4 911 aaPredicted RBP20.53■□□□□ 0.88
DNMT1-215ENST00000588913 TCEANC2Q96MN5 208 aa20.53■□□□□ 0.88
DNMT1-215ENST00000588913 HSPA4P34932 840 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 TRDNQ13061 729 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 PLS1Q14651 629 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 PPP4R3BQ5MIZ7 849 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 SH3TC2Q8TF17 1288 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 DCAF4Q8WV16 495 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 UBAC1Q9BSL1 405 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 FEM1BQ9UK73 627 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 SNX14Q9Y5W7 946 aa20.52■□□□□ 0.88
DNMT1-215ENST00000588913 IFIT3O14879 490 aaKnown RBP20.51■□□□□ 0.87
DNMT1-215ENST00000588913 ZNF536O15090 1300 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 ZNF543Q08ER8 600 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 PRPF38AQ8NAV1 312 aaKnown RBP20.51■□□□□ 0.87
DNMT1-215ENST00000588913 USP26Q9BXU7 913 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 SLC38A10Q9HBR0 1119 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 PRR12Q9ULL5 1215 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 ZNFX1Q9P2E3 1918 aaKnown RBP20.51■□□□□ 0.87
DNMT1-215ENST00000588913 PRC1O43663 620 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 ERCC3P19447 782 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 PKN2Q16513 984 aaKnown RBP20.51■□□□□ 0.87
DNMT1-215ENST00000588913 SLC35G1Q2M3R5 365 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 MORN1Q5T089 497 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 USP6NLQ92738 828 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
DNMT1-215ENST00000588913 RAVER2Q9HCJ3 691 aaKnown RBP20.51■□□□□ 0.87
DNMT1-215ENST00000588913 ELNP15502 786 aa20.5■□□□□ 0.87
DNMT1-215ENST00000588913 NT5C2P49902 561 aa20.5■□□□□ 0.87
DNMT1-215ENST00000588913 STAT2P52630 851 aa20.5■□□□□ 0.87
DNMT1-215ENST00000588913 TSGA10IPQ3SY00 556 aa20.5■□□□□ 0.87
DNMT1-215ENST00000588913 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
DNMT1-215ENST00000588913 STAG2Q8N3U4 1231 aa20.5■□□□□ 0.87
DNMT1-215ENST00000588913 MB21D1Q8N884 522 aa20.5■□□□□ 0.87
DNMT1-215ENST00000588913 WDR78Q5VTH9 848 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 PLEKHH3Q7Z736 793 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 CPXCR1Q8N123 301 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 UBA5Q9GZZ9 404 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 SH2B2O14492 632 aaPredicted RBP20.49■□□□□ 0.87
DNMT1-215ENST00000588913 PLA2G6O60733 806 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 GNRH1P01148 92 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 MAPK4P31152 587 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 TRIM32Q13049 653 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 TMEM67Q5HYA8 995 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 RIOX2Q8IUF8 465 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 COA7Q96BR5 231 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 MYL10Q9BUA6 226 aa20.49■□□□□ 0.87
DNMT1-215ENST00000588913 ZNF236Q9UL36 1845 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 CYP2B6P20813 491 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 PTPREP23469 700 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 STAT3P40763 770 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 EXOSC10Q01780 885 aaKnown RBP20.48■□□□□ 0.87
DNMT1-215ENST00000588913 IKQ13123 557 aaPredicted RBP20.48■□□□□ 0.87
DNMT1-215ENST00000588913 CCDC178Q5BJE1 867 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 SNRNP48Q6IEG0 339 aaKnown RBP20.48■□□□□ 0.87
DNMT1-215ENST00000588913 NCAPG2Q86XI2 1143 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 AGBL1Q96MI9 1066 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 NEK1Q96PY6 1258 aa20.48■□□□□ 0.87
DNMT1-215ENST00000588913 CAPN15O75808 1086 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 REC8O95072 547 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 MYCP01106 439 aaPredicted RBP20.47■□□□□ 0.87
DNMT1-215ENST00000588913 WTAPQ15007 396 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 CCL14Q16627 93 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 SYDE2Q5VT97 1194 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 CCDC174Q6PII3 467 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 FAM160B2Q86V87 743 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 RAB11FIP4Q86YS3 637 aa20.47■□□□□ 0.87
DNMT1-215ENST00000588913 GOLGA6L22H0YM25 854 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 K7ELQ4 463 aaPredicted RBP20.46■□□□□ 0.87
DNMT1-215ENST00000588913 MCM5P33992 734 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 CCNA1P78396 465 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 TROAPQ12815 778 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 ARHGEF6Q15052 776 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 RNF20Q5VTR2 975 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 SHCBP1Q8NEM2 672 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 RAET1EQ8TD07 263 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 CHURC1Q8WUH1 139 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 FLRT1Q9NZU1 646 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 MAD2L2Q9UI95 211 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 LCTP09848 1927 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms