RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 GNAQP50148 359 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 EIF2B5Q13144 721 aaKnown RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 PAK2Q13177 524 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 UBE4AQ14139 1066 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 MYCBPAPQ8TBZ2 947 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 CYFIP2Q96F07 1278 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 AGBL1Q96MI9 1066 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 TIAM1Q13009 1591 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 MACROD2A1Z1Q3 448 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 NR1I2O75469 434 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 PENKP01210 267 aaPredicted RBP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 ADARP55265 1226 aaKnown RBP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 IFT81Q8WYA0 676 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 HPS3Q969F9 1004 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 RRP36Q96EU6 259 aaKnown RBP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 VMP1Q96GC9 406 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 OLFM3Q96PB7 478 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 SPZ1Q9BXG8 430 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 EBF2Q9HAK2 575 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 JADE2Q9NQC1 790 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 POLE3Q9NRF9 147 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 DMRT2Q9Y5R5 561 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 GNAI2P04899 355 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 AMPHP49418 695 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 HNRNPMP52272 730 aaKnown RBP eCLIP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 SEC24CP53992 1094 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 RAD23BP54727 409 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 OXCT1P55809 520 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 SF3A3Q12874 501 aaKnown RBP eCLIP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 ITGB3BPQ13352 177 aaPredicted RBP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 GJC2Q5T442 439 aaPredicted RBP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 RUFY4Q6ZNE9 571 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 STMN2Q93045 179 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 GGA2Q9UJY4 613 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 TOP2AP11388 1531 aaKnown RBP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 ERBINQ96RT1 1412 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 KCNA3P22001 575 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 KRT27Q7Z3Y8 459 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 RSPH3Q86UC2 560 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 C11orf74Q86VG3 221 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 SMC6Q96SB8 1091 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 SLF1Q9BQI6 1058 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 SENP2Q9HC62 589 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 ZBTB40Q9NUA8 1239 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 DACH1Q9UI36 760 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 ANKRD62A6NC57 917 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 STX10O60499 249 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 LMBRD2Q68DH5 695 aaPredicted RBP8.57□□□□□ -1.04
LAMA3-210ENST00000588770 TCEANC2Q96MN5 208 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 TRPV5Q9NQA5 729 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 PDP2Q9P2J9 529 aa8.57□□□□□ -1.04
LAMA3-210ENST00000588770 CFTRP13569 1480 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 TBC1D12O60347 775 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 OPHN1O60890 802 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 UBTFL1P0CB47 393 aaPredicted RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 POTEJP0CG39 1038 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 PRKAR2BP31323 418 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 PHBP35232 272 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 PAFAH1B1P43034 410 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 GUCY2DQ02846 1103 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 KCNA1Q09470 495 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 MAP3K12Q12852 859 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 LRRC43Q8N309 656 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 AGAP11Q8TF27 550 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 PPP2R3CQ969Q6 453 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 NACAP1Q9BZK3 213 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 FAM192AQ9GZU8 254 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 TTF2Q9UNY4 1162 aaKnown RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 KIF5AQ12840 1032 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 ZC3H18Q86VM9 953 aaKnown RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 ERICH1Q86X53 443 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 RPS6KC1Q96S38 1066 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 HOXD11P31277 338 aaPredicted RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 TMPOP42166 694 aaKnown RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 TRIM65Q6PJ69 517 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 PLEKHM2Q8IWE5 1019 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 USHBP1Q8N6Y0 703 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 XAGE2Q96GT9 111 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 MAML3Q96JK9 1138 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 PCMTD2Q9NV79 361 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 STIM2Q9P246 746 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 MGRN1O60291 552 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 TSPAN9O75954 239 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 IL4RP24394 825 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 IKQ13123 557 aaPredicted RBP8.56□□□□□ -1.04
LAMA3-210ENST00000588770 EVI5LQ96CN4 794 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 MKS1Q9NXB0 559 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 BTBD7Q9P203 1132 aa8.56□□□□□ -1.04
LAMA3-210ENST00000588770 VWA3AA6NCI4 1184 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 SPDYE5A6NIY4 337 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 MDH1P40925 334 aaKnown RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 SAFBQ15424 915 aaKnown RBP eCLIP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 PARP10Q53GL7 1025 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 CYP26C1Q6V0L0 522 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 DNAJC9Q8WXX5 260 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 SKA1Q96BD8 255 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 SEC16BQ96JE7 1060 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms