RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.09■■□□□ 1.13
CCDC43-204ENST00000588687 KBTBD3Q8NAB2 608 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 FGD4Q96M96 766 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 SLF1Q9BQI6 1058 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 TEX13BQ9BXU2 312 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 TTYH1Q9H313 450 aaPredicted RBP22.09■■□□□ 1.13
CCDC43-204ENST00000588687 NYAP2Q9P242 653 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 SYNRGQ9UMZ2 1314 aa22.08■■□□□ 1.13
CCDC43-204ENST00000588687 KIAA0355O15063 1070 aa22.08■■□□□ 1.13
CCDC43-204ENST00000588687 AKR1A1P14550 325 aa22.08■■□□□ 1.13
CCDC43-204ENST00000588687 SMAD3P84022 425 aaKnown RBP22.08■■□□□ 1.13
CCDC43-204ENST00000588687 MAMDC4Q6UXC1 1216 aa22.08■■□□□ 1.13
CCDC43-204ENST00000588687 RNF180Q86T96 592 aa22.08■■□□□ 1.13
CCDC43-204ENST00000588687 COL25A1Q9BXS0 654 aaPredicted RBP22.08■■□□□ 1.13
CCDC43-204ENST00000588687 ECHDC1Q9NTX5 307 aa22.08■■□□□ 1.13
CCDC43-204ENST00000588687 LRRC37A2A6NM11 1700 aa22.08■■□□□ 1.12
CCDC43-204ENST00000588687 SYNGAP1Q96PV0 1343 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 F5H6K3 240 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 ATP2A1O14983 1001 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 SNAI1O95863 264 aaPredicted RBP22.07■■□□□ 1.12
CCDC43-204ENST00000588687 CLTBP09497 229 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 KLRC3Q07444 240 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 SNRNP48Q6IEG0 339 aaKnown RBP22.07■■□□□ 1.12
CCDC43-204ENST00000588687 CCSAPQ6IQ19 270 aaPredicted RBP22.07■■□□□ 1.12
CCDC43-204ENST00000588687 MSL3Q8N5Y2 521 aaKnown RBP22.07■■□□□ 1.12
CCDC43-204ENST00000588687 APPBP2Q92624 585 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 CDX2Q99626 313 aaPredicted RBP22.07■■□□□ 1.12
CCDC43-204ENST00000588687 CHMP4BQ9H444 224 aaKnown RBP22.07■■□□□ 1.12
CCDC43-204ENST00000588687 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 PLIN4Q96Q06 1357 aa22.07■■□□□ 1.12
CCDC43-204ENST00000588687 ADCY6O43306 1168 aa22.06■■□□□ 1.12
CCDC43-204ENST00000588687 TSHZ3Q63HK5 1081 aa22.06■■□□□ 1.12
CCDC43-204ENST00000588687 ANKRD33Q7Z3H0 272 aa22.06■■□□□ 1.12
CCDC43-204ENST00000588687 KLHDC9Q8NEP7 349 aa22.06■■□□□ 1.12
CCDC43-204ENST00000588687 SEMA6BQ9H3T3 888 aa22.06■■□□□ 1.12
CCDC43-204ENST00000588687 TACC3Q9Y6A5 838 aa22.06■■□□□ 1.12
CCDC43-204ENST00000588687 RAD21O60216 631 aa22.05■■□□□ 1.12
CCDC43-204ENST00000588687 TSEN34Q9BSV6 310 aaKnown RBP22.05■■□□□ 1.12
CCDC43-204ENST00000588687 CNPY2Q9Y2B0 182 aa22.05■■□□□ 1.12
CCDC43-204ENST00000588687 CHD7Q9P2D1 2997 aa22.05■■□□□ 1.12
CCDC43-204ENST00000588687 MYADML2A6NDP7 307 aa22.04■■□□□ 1.12
CCDC43-204ENST00000588687 M0R2C6 588 aa22.04■■□□□ 1.12
CCDC43-204ENST00000588687 GPAA1O43292 621 aa22.04■■□□□ 1.12
CCDC43-204ENST00000588687 PQBP1O60828 265 aaKnown RBP22.04■■□□□ 1.12
CCDC43-204ENST00000588687 ACLYP53396 1101 aa22.04■■□□□ 1.12
CCDC43-204ENST00000588687 FAAP100Q0VG06 881 aa22.04■■□□□ 1.12
CCDC43-204ENST00000588687 ZNF467Q7Z7K2 595 aaPredicted RBP22.04■■□□□ 1.12
CCDC43-204ENST00000588687 STK11IPQ8N1F8 1099 aa22.04■■□□□ 1.12
CCDC43-204ENST00000588687 PRPF38AQ8NAV1 312 aaKnown RBP22.04■■□□□ 1.12
CCDC43-204ENST00000588687 SLC38A10Q9HBR0 1119 aa22.04■■□□□ 1.12
CCDC43-204ENST00000588687 TTC28Q96AY4 2481 aa22.03■■□□□ 1.12
CCDC43-204ENST00000588687 CST5P28325 142 aaPredicted RBP22.03■■□□□ 1.12
CCDC43-204ENST00000588687 IRX5P78411 483 aaPredicted RBP22.03■■□□□ 1.12
CCDC43-204ENST00000588687 MKL1Q969V6 931 aa22.03■■□□□ 1.12
CCDC43-204ENST00000588687 CEP95Q96GE4 821 aa22.03■■□□□ 1.12
CCDC43-204ENST00000588687 TOX2Q96NM4 488 aa22.03■■□□□ 1.12
CCDC43-204ENST00000588687 SYNPO2Q9UMS6 1093 aa22.03■■□□□ 1.12
CCDC43-204ENST00000588687 MINDY4BA8MYZ0 360 aa22.02■■□□□ 1.12
CCDC43-204ENST00000588687 RNF113AO15541 343 aaKnown RBP22.02■■□□□ 1.12
CCDC43-204ENST00000588687 KATNBL1Q9H079 304 aa22.02■■□□□ 1.12
CCDC43-204ENST00000588687 DCTPP1Q9H773 170 aa22.02■■□□□ 1.12
CCDC43-204ENST00000588687 MKNK2Q9HBH9 465 aa22.02■■□□□ 1.12
CCDC43-204ENST00000588687 MTMR4Q9NYA4 1195 aa22.02■■□□□ 1.12
CCDC43-204ENST00000588687 TBX21Q9UL17 535 aa22.02■■□□□ 1.12
CCDC43-204ENST00000588687 MOXD2PA6NHM9 499 aa22.01■■□□□ 1.11
CCDC43-204ENST00000588687 PRDM1O75626 825 aa22.01■■□□□ 1.11
CCDC43-204ENST00000588687 LRRC47Q8N1G4 583 aaKnown RBP22.01■■□□□ 1.11
CCDC43-204ENST00000588687 GMCL1P1Q8NEA9 526 aa22.01■■□□□ 1.11
CCDC43-204ENST00000588687 RAVER2Q9HCJ3 691 aaKnown RBP22.01■■□□□ 1.11
CCDC43-204ENST00000588687 STARD7Q9NQZ5 370 aa22.01■■□□□ 1.11
CCDC43-204ENST00000588687 CLIP2Q9UDT6 1046 aa22.01■■□□□ 1.11
CCDC43-204ENST00000588687 ZHX1Q9UKY1 873 aaPredicted RBP22.01■■□□□ 1.11
CCDC43-204ENST00000588687 FAM184BQ9ULE4 1060 aa22.01■■□□□ 1.11
CCDC43-204ENST00000588687 LCTP09848 1927 aa22.01■■□□□ 1.11
CCDC43-204ENST00000588687 TMEM265A0A087WTH1 108 aa22■■□□□ 1.11
CCDC43-204ENST00000588687 DUSP11O75319 330 aaKnown RBP22■■□□□ 1.11
CCDC43-204ENST00000588687 KCNA10Q16322 511 aa22■■□□□ 1.11
CCDC43-204ENST00000588687 CPXCR1Q8N123 301 aa22■■□□□ 1.11
CCDC43-204ENST00000588687 MAFAQ8NHW3 353 aaPredicted RBP22■■□□□ 1.11
CCDC43-204ENST00000588687 MYLIPQ8WY64 445 aa22■■□□□ 1.11
CCDC43-204ENST00000588687 RNPC3Q96LT9 517 aaKnown RBP22■■□□□ 1.11
CCDC43-204ENST00000588687 UPF3AQ9H1J1 476 aaKnown RBP22■■□□□ 1.11
CCDC43-204ENST00000588687 CDKN2AIPQ9NXV6 580 aaPredicted RBP22■■□□□ 1.11
CCDC43-204ENST00000588687 CTAGE5O15320 804 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
CCDC43-204ENST00000588687 RAG1P15918 1043 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 GNAT2P19087 354 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 OAZ1P54368 228 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 FPGSQ05932 587 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 ACVR2BQ13705 512 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 KIFC2Q96AC6 838 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 DDX11Q96FC9 970 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 TMEM39AQ9NV64 488 aa21.99■■□□□ 1.11
CCDC43-204ENST00000588687 TTLL1O95922 423 aa21.98■■□□□ 1.11
CCDC43-204ENST00000588687 TDO2P48775 406 aa21.98■■□□□ 1.11
CCDC43-204ENST00000588687 CDK7P50613 346 aa21.98■■□□□ 1.11
CCDC43-204ENST00000588687 IFNL3Q8IZI9 196 aa21.98■■□□□ 1.11
CCDC43-204ENST00000588687 PI4K2BQ8TCG2 481 aa21.98■■□□□ 1.11
CCDC43-204ENST00000588687 NUP133Q8WUM0 1156 aa21.98■■□□□ 1.11
CCDC43-204ENST00000588687 FEM1BQ9UK73 627 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms