RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TLL2Q9Y6L7 1015 aa26.21■■□□□ 1.79
ACTN4-210ENST00000588618 STK36Q9NRP7 1315 aa26.21■■□□□ 1.79
ACTN4-210ENST00000588618 ZBTB48P10074 688 aaPredicted RBP26.2■■□□□ 1.79
ACTN4-210ENST00000588618 MKRN3Q13064 507 aaKnown RBP26.2■■□□□ 1.79
ACTN4-210ENST00000588618 RGMBQ6NW40 437 aa26.2■■□□□ 1.79
ACTN4-210ENST00000588618 FAM160B2Q86V87 743 aa26.2■■□□□ 1.79
ACTN4-210ENST00000588618 WASF1Q92558 559 aa26.2■■□□□ 1.79
ACTN4-210ENST00000588618 SEC63Q9UGP8 760 aaKnown RBP26.2■■□□□ 1.79
ACTN4-210ENST00000588618 RLFQ13129 1914 aa26.2■■□□□ 1.78
ACTN4-210ENST00000588618 PKN1Q16512 942 aa26.19■■□□□ 1.78
ACTN4-210ENST00000588618 SAMD1Q6SPF0 538 aaPredicted RBP26.19■■□□□ 1.78
ACTN4-210ENST00000588618 FASTKD5Q7L8L6 764 aaKnown RBP26.19■■□□□ 1.78
ACTN4-210ENST00000588618 PROCA1Q8NCQ7 364 aaPredicted RBP26.19■■□□□ 1.78
ACTN4-210ENST00000588618 PIBF1Q8WXW3 757 aa26.19■■□□□ 1.78
ACTN4-210ENST00000588618 RRP36Q96EU6 259 aaKnown RBP26.19■■□□□ 1.78
ACTN4-210ENST00000588618 RIOX1Q9H6W3 641 aa26.19■■□□□ 1.78
ACTN4-210ENST00000588618 V9GY48 417 aaPredicted RBP26.19■■□□□ 1.78
ACTN4-210ENST00000588618 DEXIO95424 95 aa26.19■■□□□ 1.78
ACTN4-210ENST00000588618 GTF2A2P52657 109 aa26.19■■□□□ 1.78
ACTN4-210ENST00000588618 PRPF3O43395 683 aaKnown RBP26.18■■□□□ 1.78
ACTN4-210ENST00000588618 SYDE2Q5VT97 1194 aa26.18■■□□□ 1.78
ACTN4-210ENST00000588618 SPRYD7Q5W111 196 aa26.18■■□□□ 1.78
ACTN4-210ENST00000588618 HOMER1Q86YM7 354 aa26.18■■□□□ 1.78
ACTN4-210ENST00000588618 ADGRF4Q8IZF3 695 aa26.18■■□□□ 1.78
ACTN4-210ENST00000588618 GJB4Q9NTQ9 266 aa26.18■■□□□ 1.78
ACTN4-210ENST00000588618 FLOT1O75955 427 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 SYT1P21579 422 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 KIFC2Q96AC6 838 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 SHISA4Q96DD7 197 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 FBXO28Q9NVF7 368 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 PLA2G6O60733 806 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 CETPP11597 493 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 PDCP20941 246 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 BTNL9Q6UXG8 535 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 SLF1Q9BQI6 1058 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 JMJD4Q9H9V9 463 aa26.17■■□□□ 1.78
ACTN4-210ENST00000588618 SMCHD1A6NHR9 2005 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L15C9J2P7 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L13C9JLJ4 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L11C9JVI0 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L18D6R9N7 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L22D6RA61 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L17D6RBQ6 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L19D6RCP7 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L20D6RJB6 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 FOSBP53539 338 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 USP17L24Q0WX57 530 aa26.16■■□□□ 1.78
ACTN4-210ENST00000588618 PAXIP1Q6ZW49 1069 aaPredicted RBP26.16■■□□□ 1.78
ACTN4-210ENST00000588618 PABPC4Q13310 644 aaKnown RBP eCLIP26.15■■□□□ 1.781e-23■□□□□ 9.6
ACTN4-210ENST00000588618 RASAL3Q86YV0 1011 aa26.15■■□□□ 1.78
ACTN4-210ENST00000588618 PRPF38AQ8NAV1 312 aaKnown RBP26.15■■□□□ 1.78
ACTN4-210ENST00000588618 CCDC102AQ96A19 550 aa26.15■■□□□ 1.78
ACTN4-210ENST00000588618 PIGSQ96S52 555 aa26.15■■□□□ 1.78
ACTN4-210ENST00000588618 PRR12Q9ULL5 1215 aa26.15■■□□□ 1.78
ACTN4-210ENST00000588618 XBP1P17861 261 aa26.14■■□□□ 1.78
ACTN4-210ENST00000588618 APLP1P51693 650 aa26.14■■□□□ 1.78
ACTN4-210ENST00000588618 LARP1BQ659C4 914 aaKnown RBP26.14■■□□□ 1.78
ACTN4-210ENST00000588618 MTMR8Q96EF0 704 aa26.14■■□□□ 1.78
ACTN4-210ENST00000588618 HHIPL1Q96JK4 782 aa26.14■■□□□ 1.78
ACTN4-210ENST00000588618 ALG1Q9BT22 464 aa26.14■■□□□ 1.78
ACTN4-210ENST00000588618 AGTPBP1Q9UPW5 1226 aa26.14■■□□□ 1.78
ACTN4-210ENST00000588618 CTDP1Q9Y5B0 961 aaPredicted RBP26.14■■□□□ 1.78
ACTN4-210ENST00000588618 MOGSQ13724 837 aa26.14■■□□□ 1.77
ACTN4-210ENST00000588618 TRIM29Q14134 588 aa26.14■■□□□ 1.77
ACTN4-210ENST00000588618 TREML2Q5T2D2 321 aa26.14■■□□□ 1.77
ACTN4-210ENST00000588618 OTUD7BQ6GQQ9 843 aa26.14■■□□□ 1.77
ACTN4-210ENST00000588618 ZDHHC9Q9Y397 364 aa26.14■■□□□ 1.77
ACTN4-210ENST00000588618 CCL15-CCL14A0A0B4J2E2 113 aa26.13■■□□□ 1.77
ACTN4-210ENST00000588618 SCG2P13521 617 aa26.13■■□□□ 1.77
ACTN4-210ENST00000588618 CCL15Q16663 113 aa26.13■■□□□ 1.77
ACTN4-210ENST00000588618 CATSPERGQ6ZRH7 1159 aa26.13■■□□□ 1.77
ACTN4-210ENST00000588618 CREBZFQ9NS37 354 aa26.13■■□□□ 1.77
ACTN4-210ENST00000588618 H3BQV1 296 aa26.12■■□□□ 1.77
ACTN4-210ENST00000588618 ZBTB5O15062 677 aa26.12■■□□□ 1.77
ACTN4-210ENST00000588618 SNAP25P60880 206 aa26.12■■□□□ 1.77
ACTN4-210ENST00000588618 IRX3P78415 501 aaPredicted RBP26.12■■□□□ 1.77
ACTN4-210ENST00000588618 COG2Q14746 738 aa26.12■■□□□ 1.77
ACTN4-210ENST00000588618 CDC37Q16543 378 aaPredicted RBP26.12■■□□□ 1.77
ACTN4-210ENST00000588618 PFKFB3Q16875 520 aaPredicted RBP26.12■■□□□ 1.77
ACTN4-210ENST00000588618 IFFO2Q5TF58 517 aa26.12■■□□□ 1.77
ACTN4-210ENST00000588618 C8orf76Q96K31 380 aa26.12■■□□□ 1.77
ACTN4-210ENST00000588618 PPP1R9AQ9ULJ8 1098 aa26.12■■□□□ 1.77
ACTN4-210ENST00000588618 COL11A1P12107 1806 aaPredicted RBP26.12■■□□□ 1.77
ACTN4-210ENST00000588618 PNMA6FA0A0J9YX94 578 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 PPP1R11O60927 126 aaPredicted RBP26.11■■□□□ 1.77
ACTN4-210ENST00000588618 SLC10A3P09131 477 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 PDIA4P13667 645 aaKnown RBP26.11■■□□□ 1.77
ACTN4-210ENST00000588618 GUCY1B3Q02153 619 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 GPKOWQ92917 476 aaPredicted RBP eCLIP26.11■■□□□ 1.77
ACTN4-210ENST00000588618 MS4A4AQ96JQ5 239 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 HOXC10Q9NYD6 342 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 MTMR6Q9Y217 621 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 STX6O43752 255 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 HOXA7P31268 230 aaPredicted RBP26.11■■□□□ 1.77
ACTN4-210ENST00000588618 HEATR3Q7Z4Q2 680 aa26.11■■□□□ 1.77
ACTN4-210ENST00000588618 CIZ1Q9ULV3 898 aaPredicted RBP26.11■■□□□ 1.77
ACTN4-210ENST00000588618 MANSC4A6NHS7 340 aaPredicted RBP26.1■■□□□ 1.77
ACTN4-210ENST00000588618 FDX1P10109 184 aa26.1■■□□□ 1.77
ACTN4-210ENST00000588618 OSBPP22059 807 aa26.1■■□□□ 1.77
ACTN4-210ENST00000588618 GRM1Q13255 1194 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms