RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 NEMFO60524 1076 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 USP17L24Q0WX57 530 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 KCTD2Q14681 263 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 ZNF174Q15697 407 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 USH1GQ495M9 461 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 APOBEC3HQ6NTF7 200 aaKnown RBP8.46□□□□□ -1.06
ZNF554-202ENST00000588534 STOX1Q6ZVD7 989 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 MTMR14Q8NCE2 650 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 DNAI2Q9GZS0 605 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 KCNJ14Q9UNX9 436 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 KDM3AQ9Y4C1 1321 aa8.46□□□□□ -1.06
ZNF554-202ENST00000588534 MARCKSP29966 332 aaPredicted RBP8.45□□□□□ -1.06
ZNF554-202ENST00000588534 RASSF7Q02833 373 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 SAMD3Q8N6K7 520 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 SLC44A5Q8NCS7 719 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 LEO1Q8WVC0 666 aaPredicted RBP8.45□□□□□ -1.06
ZNF554-202ENST00000588534 NAP1L5Q96NT1 182 aaPredicted RBP8.45□□□□□ -1.06
ZNF554-202ENST00000588534 MXD3Q9BW11 206 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 TRIM5Q9C035 493 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 EXOC1Q9NV70 894 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 RTEL1Q9NZ71 1219 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
ZNF554-202ENST00000588534 CDC37Q16543 378 aaPredicted RBP8.45□□□□□ -1.06
ZNF554-202ENST00000588534 UVSSAQ2YD98 709 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 ADALQ6DHV7 355 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 ANKRD35Q8N283 1001 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 MB21D1Q8N884 522 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 ZNF280CQ8ND82 737 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 AK8Q96MA6 479 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 VCPKMTQ9H867 229 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 GDPD2Q9HCC8 539 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 ARHGEF16Q5VV41 709 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 KCTD1Q719H9 257 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 SCYL3Q8IZE3 742 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 IL17RAQ96F46 866 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 MAGEF1Q9HAY2 307 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 POLR3EQ9NVU0 708 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 TBC1D12O60347 775 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 PPP6R2O75170 966 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 SERPINC1P01008 464 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 LONP1P36776 959 aaKnown RBP8.45□□□□□ -1.06
ZNF554-202ENST00000588534 SPAG1Q07617 926 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 SPP2Q13103 211 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 SAMD7Q7Z3H4 446 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 USP37Q86T82 979 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 TXLNBQ8N3L3 684 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 ANKS1AQ92625 1134 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 PIGSQ96S52 555 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 GPRC5DQ9NZD1 345 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 LRWD1Q9UFC0 647 aa8.45□□□□□ -1.06
ZNF554-202ENST00000588534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
ZNF554-202ENST00000588534 CAP2P40123 477 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 ZNF543Q08ER8 600 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 SV2BQ7L1I2 683 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 CKAP2LQ8IYA6 745 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 SPICE1Q8N0Z3 855 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
ZNF554-202ENST00000588534 DACT1Q9NYF0 836 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 ARFGEF2Q9Y6D5 1785 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 A0A1W2PQ27 194 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 A0A1W2PQ64 194 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 A0A1W2PQD8 194 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 BTBD18B2RXH4 712 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 WNT10BO00744 389 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 OR52Z1P0C646 297 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 IDEP14735 1019 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 EVCP57679 992 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 KIF23Q02241 960 aaPredicted RBP8.44□□□□□ -1.06
ZNF554-202ENST00000588534 PDILTQ8N807 584 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 CUEDC2Q9H467 287 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 RRAGDQ9NQL2 400 aaPredicted RBP8.44□□□□□ -1.06
ZNF554-202ENST00000588534 KCNH3Q9ULD8 1083 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.44□□□□□ -1.06
ZNF554-202ENST00000588534 BTAF1O14981 1849 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 VWA3AA6NCI4 1184 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 ARL6IP4Q66PJ3 421 aaKnown RBP8.44□□□□□ -1.06
ZNF554-202ENST00000588534 AMIGO3Q86WK7 504 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 KIF2CQ99661 725 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 WDR11Q9BZH6 1224 aa8.44□□□□□ -1.06
ZNF554-202ENST00000588534 BIN2Q9UBW5 565 aaPredicted RBP8.44□□□□□ -1.06
ZNF554-202ENST00000588534 C10orf71Q711Q0 1435 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 DUOX1Q9NRD9 1551 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 PSMA7O14818 248 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 RHBDL3P58872 404 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 GRM1Q13255 1194 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 COG2Q14746 738 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 SLC39A14Q15043 492 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 PAGR1Q9BTK6 254 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 AGXT2Q9BYV1 514 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 ZNHIT6Q9NWK9 470 aaKnown RBP8.43□□□□□ -1.06
ZNF554-202ENST00000588534 BARHL2Q9NY43 387 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 ITGB4P16144 1822 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 SYCE3A1L190 88 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 CMA1P23946 247 aa8.43□□□□□ -1.06
ZNF554-202ENST00000588534 CCT6AP40227 531 aaKnown RBP8.43□□□□□ -1.06
ZNF554-202ENST00000588534 CETN1Q12798 172 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms