RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 MYO7AQ13402 2215 aa8.79□□□□□ -1
TPM4-210ENST00000588507 H7C1W4 665 aa8.79□□□□□ -1
TPM4-210ENST00000588507 DUSP11O75319 330 aaKnown RBP8.79□□□□□ -1
TPM4-210ENST00000588507 EYA4O95677 639 aa8.79□□□□□ -1
TPM4-210ENST00000588507 HOXB7P09629 217 aa8.79□□□□□ -1
TPM4-210ENST00000588507 LMNB2Q03252 620 aa8.79□□□□□ -1
TPM4-210ENST00000588507 IFIT5Q13325 482 aaKnown RBP8.79□□□□□ -1
TPM4-210ENST00000588507 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
TPM4-210ENST00000588507 LBX2Q6XYB7 198 aa8.79□□□□□ -1
TPM4-210ENST00000588507 UBE3BQ7Z3V4 1068 aa8.79□□□□□ -1
TPM4-210ENST00000588507 ZGPATQ8N5A5 531 aaKnown RBP8.79□□□□□ -1
TPM4-210ENST00000588507 RPGRIP1Q96KN7 1286 aa8.79□□□□□ -1
TPM4-210ENST00000588507 TINF2Q9BSI4 451 aa8.79□□□□□ -1
TPM4-210ENST00000588507 C17orf80Q9BSJ5 609 aa8.79□□□□□ -1
TPM4-210ENST00000588507 SEZ6LQ9BYH1 1024 aa8.79□□□□□ -1
TPM4-210ENST00000588507 TRPV6Q9H1D0 765 aa8.79□□□□□ -1
TPM4-210ENST00000588507 PHAXQ9H814 394 aaKnown RBP8.79□□□□□ -1
TPM4-210ENST00000588507 KIF16BQ96L93 1317 aa8.79□□□□□ -1
TPM4-210ENST00000588507 CEP295Q9C0D2 2601 aa8.78□□□□□ -1
TPM4-210ENST00000588507 B4GALT4O60513 344 aa8.78□□□□□ -1
TPM4-210ENST00000588507 IGKV5-2P06315 115 aa8.78□□□□□ -1
TPM4-210ENST00000588507 IRX5P78411 483 aaPredicted RBP8.78□□□□□ -1
TPM4-210ENST00000588507 SHC2P98077 582 aa8.78□□□□□ -1
TPM4-210ENST00000588507 RRP1BQ14684 758 aaKnown RBP8.78□□□□□ -1
TPM4-210ENST00000588507 CAVIN4Q5BKX8 364 aa8.78□□□□□ -1
TPM4-210ENST00000588507 GNASQ5JWF2 1037 aa8.78□□□□□ -1
TPM4-210ENST00000588507 USP17L2Q6R6M4 530 aa8.78□□□□□ -1
TPM4-210ENST00000588507 LDHAL6AQ6ZMR3 332 aa8.78□□□□□ -1
TPM4-210ENST00000588507 TMCO2Q7Z6W1 182 aaPredicted RBP8.78□□□□□ -1
TPM4-210ENST00000588507 CCDC105Q8IYK2 499 aa8.78□□□□□ -1
TPM4-210ENST00000588507 ABRAQ8N0Z2 381 aa8.78□□□□□ -1
TPM4-210ENST00000588507 PHF7Q9BWX1 381 aaPredicted RBP8.78□□□□□ -1
TPM4-210ENST00000588507 MOV10L1Q9BXT6 1211 aaKnown RBP8.78□□□□□ -1
TPM4-210ENST00000588507 MFSD1Q9H3U5 465 aa8.78□□□□□ -1
TPM4-210ENST00000588507 CNNM1Q9NRU3 951 aa8.78□□□□□ -1
TPM4-210ENST00000588507 EMILIN3Q9NT22 766 aa8.78□□□□□ -1
TPM4-210ENST00000588507 CNPY2Q9Y2B0 182 aa8.78□□□□□ -1
TPM4-210ENST00000588507 RALGAPA2Q2PPJ7 1873 aa8.78□□□□□ -1
TPM4-210ENST00000588507 CLSPNQ9HAW4 1339 aa8.78□□□□□ -1
TPM4-210ENST00000588507 BPTFQ12830 3046 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 TBX10O75333 385 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 GJB5O95377 273 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 DDX58O95786 925 aaKnown RBP8.77□□□□□ -1.01
TPM4-210ENST00000588507 ERCC3P19447 782 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 PMLP29590 882 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 ZEB1P37275 1124 aaPredicted RBP8.77□□□□□ -1.01
TPM4-210ENST00000588507 ZNF200P98182 395 aaPredicted RBP8.77□□□□□ -1.01
TPM4-210ENST00000588507 GPM6BQ13491 265 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 PICALMQ13492 652 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 ITGA7Q13683 1181 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 GCKRQ14397 625 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 SOWAHCQ53LP3 525 aaPredicted RBP8.77□□□□□ -1.01
TPM4-210ENST00000588507 ZC3H14Q6PJT7 736 aaKnown RBP8.77□□□□□ -1.01
TPM4-210ENST00000588507 CATSPERGQ6ZRH7 1159 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 UBALD2Q8IYN6 164 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 ATAD5Q96QE3 1844 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 CDK5RAP2Q96SN8 1893 aa8.77□□□□□ -1.01
TPM4-210ENST00000588507 COL11A1P12107 1806 aaPredicted RBP8.76□□□□□ -1.01
TPM4-210ENST00000588507 H3BNC9 293 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 CABYRO75952 493 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 ASNSP08243 561 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 RRP1P56182 461 aaKnown RBP8.76□□□□□ -1.01
TPM4-210ENST00000588507 GJA9P57773 515 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 WDR5P61964 334 aaKnown RBP8.76□□□□□ -1.01
TPM4-210ENST00000588507 HYAL1Q12794 435 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 KDF1Q8NAX2 398 aaPredicted RBP8.76□□□□□ -1.01
TPM4-210ENST00000588507 DTWD2Q8NBA8 298 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 WDR66Q8TBY9 1149 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 MSLNLQ96KJ4 702 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 SAMD11Q96NU1 681 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 SIL1Q9H173 461 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 UPF3AQ9H1J1 476 aaKnown RBP8.76□□□□□ -1.01
TPM4-210ENST00000588507 DDX4Q9NQI0 724 aaKnown RBP8.76□□□□□ -1.01
TPM4-210ENST00000588507 MBIPQ9NS73 344 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 NCDNQ9UBB6 729 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 SCN5AQ14524 2016 aa8.76□□□□□ -1.01
TPM4-210ENST00000588507 SUPT20HL2P0C7V6 817 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 FCER1AP12319 257 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 NDUFV1P49821 464 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 NEXNQ0ZGT2 675 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 EPC2Q52LR7 807 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 TAF7LQ5H9L4 462 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 KREMEN2Q8NCW0 462 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 MROH8Q9H579 483 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 IGFLR1Q9H665 355 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 INCENPQ9NQS7 918 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 DIS3Q9Y2L1 958 aaKnown RBP8.75□□□□□ -1.01
TPM4-210ENST00000588507 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 ZNF462Q96JM2 2506 aa8.75□□□□□ -1.01
TPM4-210ENST00000588507 ZZEF1O43149 2961 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 SPEGQ15772 3267 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 SPDYE16A6NNV3 312 aaPredicted RBP8.74□□□□□ -1.01
TPM4-210ENST00000588507 CYP2C9P11712 490 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 AOC1P19801 751 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 DEFB103AP81534 67 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 ADAM15Q13444 863 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 MTMR3Q13615 1198 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms