RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 FAM83BQ5T0W9 1011 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 C12orf60Q5U649 245 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 CCSAPQ6IQ19 270 aaPredicted RBP18.41■□□□□ 0.54
IFT20-216ENST00000588477 C16orf59Q7L2K0 433 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 REPS2Q8NFH8 660 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 PBX4Q9BYU1 374 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 KANSL2Q9H9L4 492 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 TBX21Q9UL17 535 aa18.41■□□□□ 0.54
IFT20-216ENST00000588477 MYADML2A6NDP7 307 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 USP17L12C9JPN9 530 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 USP17L21D6R901 530 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 APBB1O00213 710 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 IRX5P78411 483 aaPredicted RBP18.4■□□□□ 0.54
IFT20-216ENST00000588477 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.54
IFT20-216ENST00000588477 HSP90AB4PQ58FF6 505 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 TMEM240Q5SV17 173 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 C16orf86Q6ZW13 317 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 AMOTL1Q8IY63 956 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.4■□□□□ 0.54
IFT20-216ENST00000588477 VTI1AQ96AJ9 217 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 DDX11Q96FC9 970 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 GLT1D1Q96MS3 346 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 PRDM12Q9H4Q4 367 aa18.4■□□□□ 0.54
IFT20-216ENST00000588477 ZHX1Q9UKY1 873 aaPredicted RBP18.4■□□□□ 0.54
IFT20-216ENST00000588477 REV3LO60673 3130 aa18.39■□□□□ 0.53
IFT20-216ENST00000588477 CHD9Q3L8U1 2897 aa18.39■□□□□ 0.53
IFT20-216ENST00000588477 DUSP11O75319 330 aaKnown RBP18.39■□□□□ 0.53
IFT20-216ENST00000588477 ADD2P35612 726 aa18.39■□□□□ 0.53
IFT20-216ENST00000588477 SLC4A3P48751 1232 aa18.39■□□□□ 0.53
IFT20-216ENST00000588477 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
IFT20-216ENST00000588477 MSL3Q8N5Y2 521 aaKnown RBP18.39■□□□□ 0.53
IFT20-216ENST00000588477 MROH7Q68CQ1 1323 aa18.39■□□□□ 0.53
IFT20-216ENST00000588477 SYNGAP1Q96PV0 1343 aa18.39■□□□□ 0.53
IFT20-216ENST00000588477 ASGR1P07306 291 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 IFIT2P09913 472 aaKnown RBP18.38■□□□□ 0.53
IFT20-216ENST00000588477 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
IFT20-216ENST00000588477 ACRP10323 421 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 CSF2RAP15509 400 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 CDK7P50613 346 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 SNRNP48Q6IEG0 339 aaKnown RBP18.38■□□□□ 0.53
IFT20-216ENST00000588477 CCDC174Q6PII3 467 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 MAMDC4Q6UXC1 1216 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 ATXN2LQ8WWM7 1075 aaKnown RBP18.38■□□□□ 0.53
IFT20-216ENST00000588477 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
IFT20-216ENST00000588477 PPP1R12CQ9BZL4 782 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 RAPGEFL1Q9UHV5 662 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 RIPK3Q9Y572 518 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 ELP1O95163 1332 aa18.38■□□□□ 0.53
IFT20-216ENST00000588477 ADCY6O43306 1168 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 ACVR2BQ13705 512 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 CCDC85BQ15834 202 aaPredicted RBP18.37■□□□□ 0.53
IFT20-216ENST00000588477 RASIP1Q5U651 963 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 TMEM199Q8N511 208 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 PCSK9Q8NBP7 692 aaKnown RBP18.37■□□□□ 0.53
IFT20-216ENST00000588477 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 SLF1Q9BQI6 1058 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 TEX13BQ9BXU2 312 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 THEGQ9P2T0 379 aa18.37■□□□□ 0.53
IFT20-216ENST00000588477 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 ARVCFO00192 962 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 CHGBP05060 677 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 CST5P28325 142 aaPredicted RBP18.36■□□□□ 0.53
IFT20-216ENST00000588477 AKNAD1Q5T1N1 836 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 CTR9Q6PD62 1173 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 CPXCR1Q8N123 301 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 KIF1BPQ96EK5 621 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 ASB2Q96Q27 587 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 SPC25Q9HBM1 224 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 SLC4A4Q9Y6R1 1079 aa18.36■□□□□ 0.53
IFT20-216ENST00000588477 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
IFT20-216ENST00000588477 IGFBP4P22692 258 aa18.35■□□□□ 0.53
IFT20-216ENST00000588477 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
IFT20-216ENST00000588477 GNASQ5JWF2 1037 aa18.35■□□□□ 0.53
IFT20-216ENST00000588477 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.35■□□□□ 0.53
IFT20-216ENST00000588477 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.35■□□□□ 0.53
IFT20-216ENST00000588477 TLR3O15455 904 aaKnown RBP18.34■□□□□ 0.53
IFT20-216ENST00000588477 GJA9P57773 515 aa18.34■□□□□ 0.53
IFT20-216ENST00000588477 ADGRE1Q14246 886 aa18.34■□□□□ 0.53
IFT20-216ENST00000588477 PSRC1Q6PGN9 363 aaPredicted RBP18.34■□□□□ 0.53
IFT20-216ENST00000588477 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
IFT20-216ENST00000588477 FAM126BQ8IXS8 530 aa18.34■□□□□ 0.53
IFT20-216ENST00000588477 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
IFT20-216ENST00000588477 ADAMTS19Q8TE59 1207 aa18.34■□□□□ 0.53
IFT20-216ENST00000588477 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.34■□□□□ 0.53
IFT20-216ENST00000588477 ABHD16BQ9H3Z7 469 aa18.34■□□□□ 0.53
IFT20-216ENST00000588477 MSRAQ9UJ68 235 aa18.34■□□□□ 0.53
IFT20-216ENST00000588477 CTDP1Q9Y5B0 961 aaPredicted RBP18.34■□□□□ 0.53
IFT20-216ENST00000588477 CHD7Q9P2D1 2997 aa18.33■□□□□ 0.53
IFT20-216ENST00000588477 ZBED9Q6R2W3 1325 aa18.33■□□□□ 0.53
IFT20-216ENST00000588477 F5H6K3 240 aa18.33■□□□□ 0.52
IFT20-216ENST00000588477 CYP2C18P33260 490 aa18.33■□□□□ 0.52
IFT20-216ENST00000588477 MRPS5P82675 430 aaKnown RBP18.33■□□□□ 0.52
IFT20-216ENST00000588477 KLRC3Q07444 240 aa18.33■□□□□ 0.52
IFT20-216ENST00000588477 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
IFT20-216ENST00000588477 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
IFT20-216ENST00000588477 UPF3AQ9H1J1 476 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms