RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 GTF2IRD2Q86UP8 949 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 SYTL5Q8TDW5 730 aaPredicted RBP7.51□□□□□ -1.21
TUBD1-208ENST00000588009 BRF1Q92994 677 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 PSMG3-AS1Q96PY0 264 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 NDOR1Q9UHB4 597 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 DAGLAQ9Y4D2 1042 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
TUBD1-208ENST00000588009 ALG1L2C9J202 215 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 GABREP78334 506 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 EXOSC10Q01780 885 aaKnown RBP7.5□□□□□ -1.21
TUBD1-208ENST00000588009 PRRT3Q5FWE3 981 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 AFAP1L2Q8N4X5 818 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 GSTCDQ8NEC7 633 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 JDP2Q8WYK2 163 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 CCDC140Q96MF4 163 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 CEP41Q9BYV8 373 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 PRDM14Q9GZV8 571 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 SEMA6CQ9H3T2 930 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 AKTIPQ9H8T0 292 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 SLC52A2Q9HAB3 445 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 PRDM10Q9NQV6 1147 aa7.5□□□□□ -1.21
TUBD1-208ENST00000588009 NOP53Q9NZM5 478 aaKnown RBP7.5□□□□□ -1.21
TUBD1-208ENST00000588009 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 GAS2O43903 313 aaKnown RBP7.49□□□□□ -1.21
TUBD1-208ENST00000588009 EFCAB14O75071 495 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 PROCP04070 461 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 NFICP08651 508 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 HOXC12P31275 282 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 PPP2R5DQ14738 602 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 SF1Q15637 639 aaKnown RBP7.49□□□□□ -1.21
TUBD1-208ENST00000588009 GRIK4Q16099 956 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 Q6ZS46 218 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 DDX46Q7L014 1031 aaKnown RBP7.49□□□□□ -1.21
TUBD1-208ENST00000588009 BRAPQ7Z569 592 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 AHI1Q8N157 1196 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 PPM1KQ8N3J5 372 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 ATL2Q8NHH9 583 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 FBLIM1Q8WUP2 373 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 KCTD13Q8WZ19 329 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 CHMP4AQ9BY43 222 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 NOL6Q9H6R4 1146 aaKnown RBP7.49□□□□□ -1.21
TUBD1-208ENST00000588009 PRR13Q9NZ81 148 aa7.49□□□□□ -1.21
TUBD1-208ENST00000588009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 BLACEA4D250 179 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 DYNC1LI2O43237 492 aaPredicted RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 LRRN2O75325 713 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 POU3F2P20265 443 aaPredicted RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 GFRA1P56159 465 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 MAP4K2Q12851 820 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 GRB10Q13322 594 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 SNW1Q13573 536 aaKnown RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 FAM50AQ14320 339 aaKnown RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 WWC2Q6AWC2 1192 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 STRA8Q7Z7C7 330 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 FIBCD1Q8N539 461 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 LEO1Q8WVC0 666 aaPredicted RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 EZH1Q92800 747 aaPredicted RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 PTPRN2Q92932 1015 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 YIPF2Q9BWQ6 316 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 TNPO3Q9Y5L0 923 aaKnown RBP7.48□□□□□ -1.21
TUBD1-208ENST00000588009 WASHC2CQ9Y4E1 1318 aa7.48□□□□□ -1.21
TUBD1-208ENST00000588009 EYA4O95677 639 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 ASLP04424 464 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 GLB1P16278 677 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 CPEP16870 476 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 KCNJ6P48051 423 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 NTRK3Q16288 839 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 HSP90AB2PQ58FF8 381 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 SEZ6L2Q6UXD5 910 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 FGD2Q7Z6J4 655 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 TMEM145Q8NBT3 493 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 LENG1Q96BZ8 264 aaPredicted RBP7.47□□□□□ -1.21
TUBD1-208ENST00000588009 SCLYQ96I15 445 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 FAM46AQ96IP4 442 aaKnown RBP7.47□□□□□ -1.21
TUBD1-208ENST00000588009 UBL7Q96S82 380 aaPredicted RBP7.47□□□□□ -1.21
TUBD1-208ENST00000588009 NKX2-4Q9H2Z4 354 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 CYP26B1Q9NR63 512 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 GFOD1Q9NXC2 390 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 FAN1Q9Y2M0 1017 aa7.47□□□□□ -1.21
TUBD1-208ENST00000588009 THRAP3Q9Y2W1 955 aaKnown RBP7.47□□□□□ -1.21
TUBD1-208ENST00000588009 OPA1O60313 960 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 VAMP4O75379 141 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 NPTXRO95502 500 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 ITGB2P05107 769 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 SCG5P05408 212 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 SNRPB2P08579 225 aaKnown RBP7.46□□□□□ -1.22
TUBD1-208ENST00000588009 CYP7A1P22680 504 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 PCBP1Q15365 356 aaKnown RBP eCLIP7.46□□□□□ -1.22
TUBD1-208ENST00000588009 SGO2Q562F6 1265 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 SLC35F1Q5T1Q4 408 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 FMNL3Q8IVF7 1028 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 MAGEB10Q96LZ2 347 aaPredicted RBP7.46□□□□□ -1.22
TUBD1-208ENST00000588009 ZDHHC15Q96MV8 337 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 USP21Q9UK80 565 aa7.46□□□□□ -1.22
TUBD1-208ENST00000588009 SF3B6Q9Y3B4 125 aaKnown RBP7.46□□□□□ -1.22
TUBD1-208ENST00000588009 RBAK-RBAKDNI3L0D1 243 aa7.45□□□□□ -1.22
TUBD1-208ENST00000588009 EOMESO95936 686 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms