RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TMX2Q9Y320 296 aa10.35□□□□□ -0.75
SDF2-204ENST00000587338 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
SDF2-204ENST00000587338 ELP1O95163 1332 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 TCF20Q9UGU0 1960 aaKnown RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 MUC6Q6W4X9 2439 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 A0A0U1RQG5 324 aaPredicted RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 VWA5AO00534 786 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 TLR3O15455 904 aaKnown RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 BCAR3O75815 825 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 ASGR1P07306 291 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 TRIM27P14373 513 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 AKR1B1P15121 316 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 CYP2C18P33260 490 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 COPB2P35606 906 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 STAT3P40763 770 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 KCNQ1P51787 676 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 TFF2Q03403 129 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 SKIV2LQ15477 1246 aaKnown RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 CCSAPQ6IQ19 270 aaPredicted RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 TMED8Q6PL24 325 aaPredicted RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 SIAH1Q8IUQ4 282 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 KLHDC9Q8NEP7 349 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 SDR42E1Q8WUS8 393 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 FRAT1Q92837 279 aaPredicted RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 DYNLL2Q96FJ2 89 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 ZNF214Q9UL59 606 aaPredicted RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 YBX2Q9Y2T7 364 aaKnown RBP10.34□□□□□ -0.75
SDF2-204ENST00000587338 HCN4Q9Y3Q4 1203 aa10.34□□□□□ -0.75
SDF2-204ENST00000587338 SYNGAP1Q96PV0 1343 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 COL11A1P12107 1806 aaPredicted RBP10.33□□□□□ -0.76
SDF2-204ENST00000587338 PARP14Q460N5 1801 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 ARVCFO00192 962 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
SDF2-204ENST00000587338 DUSP11O75319 330 aaKnown RBP10.33□□□□□ -0.76
SDF2-204ENST00000587338 BMP1P13497 986 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 CST5P28325 142 aaPredicted RBP10.33□□□□□ -0.76
SDF2-204ENST00000587338 CDK7P50613 346 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 AAK1Q2M2I8 961 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 PPP4R3CPQ6ZMV5 832 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 OTOP2Q7RTS6 562 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 FAM126BQ8IXS8 530 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 PCSK9Q8NBP7 692 aaKnown RBP10.33□□□□□ -0.76
SDF2-204ENST00000587338 SSH3Q8TE77 659 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 HERVK_113Q902F9 699 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 EAF2Q96CJ1 260 aaPredicted RBP10.33□□□□□ -0.76
SDF2-204ENST00000587338 DDX11Q96FC9 970 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 SPC25Q9HBM1 224 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 IL23AQ9NPF7 189 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 SWAP70Q9UH65 585 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 PPP1R9AQ9ULJ8 1098 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 ADAMTS5Q9UNA0 930 aa10.33□□□□□ -0.76
SDF2-204ENST00000587338 PRRC2BQ5JSZ5 2229 aaKnown RBP10.32□□□□□ -0.76
SDF2-204ENST00000587338 ADCY6O43306 1168 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 SNAI1O95863 264 aaPredicted RBP10.32□□□□□ -0.76
SDF2-204ENST00000587338 FGBP02675 491 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 PDE6AP16499 860 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 RABGGTBP53611 331 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 GNASQ5JWF2 1037 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 FAM83BQ5T0W9 1011 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 SLC9C2Q5TAH2 1124 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 SNRNP48Q6IEG0 339 aaKnown RBP10.32□□□□□ -0.76
SDF2-204ENST00000587338 LCORLQ8N3X6 602 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 MSL3Q8N5Y2 521 aaKnown RBP10.32□□□□□ -0.76
SDF2-204ENST00000587338 HIPK3Q9H422 1215 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 DCP1AQ9NPI6 582 aaPredicted RBP10.32□□□□□ -0.76
SDF2-204ENST00000587338 SUPT16HQ9Y5B9 1047 aaKnown RBP10.32□□□□□ -0.76
SDF2-204ENST00000587338 UMODL1Q5DID0 1318 aa10.32□□□□□ -0.76
SDF2-204ENST00000587338 ZBBXA8MT70 800 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 EEF2P13639 858 aaKnown RBP10.31□□□□□ -0.76
SDF2-204ENST00000587338 MYOGP15173 224 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 CCL23P55773 120 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 ATP8B2P98198 1209 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 ACVR2BQ13705 512 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 CCDC144BQ3MJ40 725 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 AACSQ86V21 672 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 REPS2Q8NFH8 660 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 TEX13BQ9BXU2 312 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 EPHX3Q9H6B9 360 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
SDF2-204ENST00000587338 GBF1Q92538 1859 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 MYH8P13535 1937 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 ZNF532Q9HCE3 1301 aa10.31□□□□□ -0.76
SDF2-204ENST00000587338 CYP2D7A0A087X1C5 515 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 CD4P01730 458 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 NEFLP07196 543 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 GJA9P57773 515 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 BEX3Q00994 111 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 TTF1Q15361 905 aaPredicted RBP10.3□□□□□ -0.76
SDF2-204ENST00000587338 MAMDC4Q6UXC1 1216 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 NOL8Q76FK4 1167 aaKnown RBP10.3□□□□□ -0.76
SDF2-204ENST00000587338 TMEM57Q8N5G2 664 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 CCDC17Q96LX7 622 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 NUP88Q99567 741 aaPredicted RBP10.3□□□□□ -0.76
SDF2-204ENST00000587338 UPF3AQ9H1J1 476 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms