RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 DACT1Q9NYF0 836 aa21.33■■□□□ 1
RETREG3-205ENST00000586870 ZBTB21Q9ULJ3 1066 aa21.33■■□□□ 1
RETREG3-205ENST00000586870 CXCL11O14625 94 aa21.32■■□□□ 1
RETREG3-205ENST00000586870 NBPF11Q86T75 865 aa21.32■■□□□ 1
RETREG3-205ENST00000586870 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
RETREG3-205ENST00000586870 CCDC17Q96LX7 622 aa21.32■■□□□ 1
RETREG3-205ENST00000586870 CLSTN2Q9H4D0 955 aa21.32■■□□□ 1
RETREG3-205ENST00000586870 GJB4Q9NTQ9 266 aa21.32■■□□□ 1
RETREG3-205ENST00000586870 RBM28Q9NW13 759 aaKnown RBP21.32■■□□□ 1
RETREG3-205ENST00000586870 AFG3L2Q9Y4W6 797 aa21.32■■□□□ 1
RETREG3-205ENST00000586870 KIF28PB7ZC32 967 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 CA12O43570 354 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 DDAH1O94760 285 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 SPP2Q13103 211 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 LINC00301Q8NCQ3 95 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 ZNF280CQ8ND82 737 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 KCNG4Q8TDN1 519 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 FTOQ9C0B1 505 aaKnown RBP eCLIP21.31■■□□□ 15e-9■■■■□ 21.6
RETREG3-205ENST00000586870 ROBO3Q96MS0 1386 aa21.31■■□□□ 1
RETREG3-205ENST00000586870 TRPA1O75762 1119 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 ALDH1A1P00352 501 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 STK38Q15208 465 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 CCDC178Q5BJE1 867 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 IFNL1Q8IU54 200 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 CCAR1Q8IX12 1150 aaKnown RBP21.3■■□□□ 1
RETREG3-205ENST00000586870 MS4A4AQ96JQ5 239 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 RNF26Q9BY78 433 aaPredicted RBP21.3■■□□□ 1
RETREG3-205ENST00000586870 TNMDQ9H2S6 317 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 KCNH4Q9UQ05 1017 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 FOCADQ5VW36 1801 aa21.3■■□□□ 1
RETREG3-205ENST00000586870 CCDC192P0DO97 292 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 U2AF2P26368 475 aaKnown RBP eCLIP21.29■■□□□ 18e-7■■■■□ 26.3
RETREG3-205ENST00000586870 ME1P48163 572 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 JAG1P78504 1218 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 RBM43Q6ZSC3 357 aaKnown RBP21.29■■□□□ 1
RETREG3-205ENST00000586870 RNF186Q9NXI6 227 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 MYH1P12882 1939 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 NAV1Q8NEY1 1877 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 A0A1W2PQ27 194 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 A0A1W2PQ64 194 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 A0A1W2PQD8 194 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 NR1I2O75469 434 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 GNL2Q13823 731 aaKnown RBP21.29■■□□□ 1
RETREG3-205ENST00000586870 SAFBQ15424 915 aaKnown RBP eCLIP21.29■■□□□ 1
RETREG3-205ENST00000586870 SHROOM1Q2M3G4 852 aaPredicted RBP21.29■■□□□ 1
RETREG3-205ENST00000586870 ANO1Q5XXA6 986 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 ADALQ6DHV7 355 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 GADL1Q6ZQY3 521 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 CCDC73Q6ZRK6 1079 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 TMEM179Q6ZVK1 233 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 FASTKD5Q7L8L6 764 aaKnown RBP21.29■■□□□ 1
RETREG3-205ENST00000586870 RNF214Q8ND24 703 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 BRI3BPQ8WY22 251 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 CLIC4Q9Y696 253 aa21.29■■□□□ 1
RETREG3-205ENST00000586870 TESPA1A2RU30 521 aaPredicted RBP21.28■■□□□ 1
RETREG3-205ENST00000586870 TSPY2A6NKD2 308 aa21.28■■□□□ 1
RETREG3-205ENST00000586870 AKR1B1P15121 316 aa21.28■■□□□ 1
RETREG3-205ENST00000586870 TROAPQ12815 778 aa21.28■■□□□ 1
RETREG3-205ENST00000586870 SF3A1Q15459 793 aaKnown RBP21.28■■□□□ 1
RETREG3-205ENST00000586870 FEZ1Q99689 392 aa21.28■■□□□ 1
RETREG3-205ENST00000586870 WDR18Q9BV38 432 aa21.28■■□□□ 1
RETREG3-205ENST00000586870 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.28■■□□□ 1
RETREG3-205ENST00000586870 PCDHA7Q9UN72 937 aa21.28■■□□□ 1
RETREG3-205ENST00000586870 USP17L10C9JJH3 530 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 SPTLC2O15270 562 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 CTAGE5O15320 804 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 PRPF3O43395 683 aaKnown RBP21.27■■□□□ 1
RETREG3-205ENST00000586870 AKAP17AQ02040 695 aaKnown RBP21.27■■□□□ 1
RETREG3-205ENST00000586870 SEPT2Q15019 361 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 FAM47AQ5JRC9 791 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 ANKS1AQ92625 1134 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 TRIM44Q96DX7 344 aaPredicted RBP21.27■■□□□ 1
RETREG3-205ENST00000586870 PDLIM2Q96JY6 352 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 TMOD4Q9NZQ9 345 aa21.27■■□□□ 1
RETREG3-205ENST00000586870 MMP1P03956 469 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 DGKHQ86XP1 1220 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 PTPN18Q99952 460 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 SAGE1Q9NXZ1 904 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 A0A0G2JLL6 359 aaPredicted RBP21.26■□□□□ 0.99
RETREG3-205ENST00000586870 C19orf81C9J6K1 198 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 IGF2BP3O00425 579 aaKnown RBP eCLIP21.26■□□□□ 0.99
RETREG3-205ENST00000586870 GUCY1A2P33402 732 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 CTCFP49711 727 aaPredicted RBP21.26■□□□□ 0.99
RETREG3-205ENST00000586870 BACE1P56817 501 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 TFAP4Q01664 338 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 FAM160A1Q05DH4 1040 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 MTMR2Q13614 643 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 SLC39A14Q15043 492 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 CAMK4Q16566 473 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 PRRT2Q7Z6L0 340 aaPredicted RBP21.26■□□□□ 0.99
RETREG3-205ENST00000586870 FAM43AQ8N2R8 423 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 FSIP1Q8NA03 581 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 ENGASEQ8NFI3 743 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 TCP11L1Q9NUJ3 509 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 TSKSQ9UJT2 592 aa21.26■□□□□ 0.99
RETREG3-205ENST00000586870 OTOFQ9HC10 1997 aa21.25■□□□□ 0.99
RETREG3-205ENST00000586870 FOXN1O15353 648 aa21.25■□□□□ 0.99
RETREG3-205ENST00000586870 TSPY3P0CV98 308 aa21.25■□□□□ 0.99
RETREG3-205ENST00000586870 TSPY8P0CW00 308 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms