RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 ERC2O15083 957 aa16.7■□□□□ 0.26
ATG4D-206ENST00000586863 RARBP10826 455 aa16.7■□□□□ 0.26
ATG4D-206ENST00000586863 ZNF444Q8N0Y2 327 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-206ENST00000586863 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
ATG4D-206ENST00000586863 MTMR4Q9NYA4 1195 aa16.7■□□□□ 0.26
ATG4D-206ENST00000586863 EYSQ5T1H1 3165 aa16.7■□□□□ 0.26
ATG4D-206ENST00000586863 PGK1P00558 417 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 ZNF865P0CJ78 1059 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-206ENST00000586863 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
ATG4D-206ENST00000586863 ZMYM1Q5SVZ6 1142 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 PRPF38AQ8NAV1 312 aaKnown RBP16.69■□□□□ 0.26
ATG4D-206ENST00000586863 MKL1Q969V6 931 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 PRDM5Q9NQX1 630 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-206ENST00000586863 PDLIM7Q9NR12 457 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 PRKAG2Q9UGJ0 569 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 PHF24Q9UPV7 400 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 SALL3Q9BXA9 1300 aa16.69■□□□□ 0.26
ATG4D-206ENST00000586863 ATP2A1O14983 1001 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 FOXP2O15409 715 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 TTLL1O95922 423 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 MX1P20591 662 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 SLC4A3P48751 1232 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 PPARAQ07869 468 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 NACAP1Q9BZK3 213 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 NAPBQ9H115 298 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 SLC38A10Q9HBR0 1119 aa16.68■□□□□ 0.26
ATG4D-206ENST00000586863 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
ATG4D-206ENST00000586863 DNAJC25-GNG10A0A024R161 153 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 ZBED4O75132 1171 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 AKR1A1P14550 325 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
ATG4D-206ENST00000586863 C1orf53Q5VUE5 145 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 CCDC129Q6ZRS4 1044 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 GMCL1P1Q8NEA9 526 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 MTMR10Q9NXD2 777 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 FEM1BQ9UK73 627 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 SYNPO2Q9UMS6 1093 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 CNPY2Q9Y2B0 182 aa16.67■□□□□ 0.26
ATG4D-206ENST00000586863 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 SNAI1O95863 264 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-206ENST00000586863 PDE4BQ07343 736 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 SLFN13Q68D06 897 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 RNF180Q86T96 592 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 MSL3Q8N5Y2 521 aaKnown RBP16.66■□□□□ 0.26
ATG4D-206ENST00000586863 PRUNE2Q8WUY3 3088 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 FGD4Q96M96 766 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 CTDP1Q9Y5B0 961 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-206ENST00000586863 SYNGAP1Q96PV0 1343 aa16.66■□□□□ 0.26
ATG4D-206ENST00000586863 VCANP13611 3396 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 A0A1W2PQ45 241 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-206ENST00000586863 A0A1W2PQY0 241 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 BMP3P12645 472 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 TFAP4Q01664 338 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 TLE2Q04725 743 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 MAMDC4Q6UXC1 1216 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.65■□□□□ 0.26
ATG4D-206ENST00000586863 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 BADQ92934 168 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 TRIM43Q96BQ3 446 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-206ENST00000586863 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-206ENST00000586863 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
ATG4D-206ENST00000586863 SYNRGQ9UMZ2 1314 aa16.65■□□□□ 0.26
ATG4D-206ENST00000586863 SLC3A2P08195 630 aaKnown RBP16.64■□□□□ 0.25
ATG4D-206ENST00000586863 ITGB8P26012 769 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 OAZ1P54368 228 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-206ENST00000586863 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 CRBNQ96SW2 442 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 INCENPQ9NQS7 918 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 HOMER2Q9NSB8 354 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 ISY1Q9ULR0 285 aaKnown RBP16.64■□□□□ 0.25
ATG4D-206ENST00000586863 STXBP5LQ9Y2K9 1186 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 TACC3Q9Y6A5 838 aa16.64■□□□□ 0.25
ATG4D-206ENST00000586863 MYADML2A6NDP7 307 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 POTEB2H3BUK9 544 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 ADCY6O43306 1168 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 SHHQ15465 462 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 VPS53Q5VIR6 699 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 ANKRD35Q8N283 1001 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 CHST13Q8NET6 341 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.63■□□□□ 0.25
ATG4D-206ENST00000586863 FBXO40Q9UH90 709 aa16.63■□□□□ 0.25
ATG4D-206ENST00000586863 LCTP09848 1927 aa16.62■□□□□ 0.25
ATG4D-206ENST00000586863 LRRC37A2A6NM11 1700 aa16.62■□□□□ 0.25
ATG4D-206ENST00000586863 NMT2O60551 498 aa16.62■□□□□ 0.25
ATG4D-206ENST00000586863 PQBP1O60828 265 aaKnown RBP16.62■□□□□ 0.25
ATG4D-206ENST00000586863 CLTBP09497 229 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms