RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 DEFB129Q9H1M3 183 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.75□□□□□ -0.53
APOC1-201ENST00000586638 VPS54Q9P1Q0 977 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
APOC1-201ENST00000586638 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
APOC1-201ENST00000586638 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
APOC1-201ENST00000586638 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 PPP1R12BO60237 982 aaPredicted RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 GNAQP50148 359 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 JAG1P78504 1218 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 ICA1Q05084 483 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 SEPT2Q15019 361 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 ABCB5Q2M3G0 1257 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 METTL16Q86W50 562 aaKnown RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 RGS22Q8NE09 1264 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 ZNF396Q96N95 335 aaPredicted RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 HERC5Q9UII4 1024 aaKnown RBP11.74□□□□□ -0.53
APOC1-201ENST00000586638 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
APOC1-201ENST00000586638 KLRF2D3W0D1 207 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 CYTH3O43739 400 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 ELP1O95163 1332 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 GH2P01242 217 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 PDHBP11177 359 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 SCG2P13521 617 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 UBE2HP62256 183 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 CCDC96Q2M329 555 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 SUPT20HL1Q3ZLR7 823 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 FKBP1CQ5VVH2 108 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 TMEM179Q6ZVK1 233 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 FAM83AQ86UY5 434 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
APOC1-201ENST00000586638 SCAND2PQ9GZW5 306 aaPredicted RBP11.73□□□□□ -0.53
APOC1-201ENST00000586638 TMEM63CQ9P1W3 806 aa11.73□□□□□ -0.53
APOC1-201ENST00000586638 UNCXA6NJT0 531 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 BTBD18B2RXH4 712 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 ZBTB48P10074 688 aaPredicted RBP11.72□□□□□ -0.53
APOC1-201ENST00000586638 EEF2P13639 858 aaKnown RBP11.72□□□□□ -0.53
APOC1-201ENST00000586638 TNNI2P48788 182 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 NR5A1Q13285 461 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
APOC1-201ENST00000586638 MAP3K11Q16584 847 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
APOC1-201ENST00000586638 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 PHF20Q9BVI0 1012 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 SPZ1Q9BXG8 430 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 GPCPD1Q9NPB8 672 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.72□□□□□ -0.53
APOC1-201ENST00000586638 ISY1Q9ULR0 285 aaKnown RBP11.72□□□□□ -0.53
APOC1-201ENST00000586638 PPP2R3BQ9Y5P8 575 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 CLIC4Q9Y696 253 aa11.72□□□□□ -0.53
APOC1-201ENST00000586638 CUL9Q8IWT3 2517 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 RAD21O60216 631 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 SNHG28P0DPA3 235 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 XBP1P17861 261 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.53
APOC1-201ENST00000586638 KRT2P35908 639 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 RASA3Q14644 834 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 GSE1Q14687 1217 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 ASPRV1Q53RT3 343 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 HOMER1Q86YM7 354 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 ERO1AQ96HE7 468 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 CLMNQ96JQ2 1002 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 PGBD1Q96JS3 809 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 UBA5Q9GZZ9 404 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 KANSL2Q9H9L4 492 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 CABP5Q9NP86 173 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 ZBTB21Q9ULJ3 1066 aa11.71□□□□□ -0.53
APOC1-201ENST00000586638 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 STXBP3O00186 592 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 IGF2BP3O00425 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
APOC1-201ENST00000586638 ADAMTS3O15072 1205 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 USP2O75604 605 aaPredicted RBP11.7□□□□□ -0.54
APOC1-201ENST00000586638 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 STK38Q15208 465 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 NPY5RQ15761 445 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
APOC1-201ENST00000586638 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms