RNA–Protein interactions for RNA: ENST00000586574.5

GIT1-215, Transcript of GIT ArfGAP 1, human

TSL 4

Gene GIT1, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIT1-215	ENST00000586574	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	IFIT2	P09913	472 aa	Known RBP	12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	FPGS	Q05932	587 aa		12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	KCNA10	Q16322	511 aa		12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	RASIP1	Q5U651	963 aa		12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	FGD4	Q96M96	766 aa		12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	NUP88	Q99567	741 aa	Predicted RBP	12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.83	□□□□□ -0.36	3e-6	■■■■■ 30.2
GIT1-215	ENST00000586574	PRDM6	Q9NQX0	595 aa		12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	ZBTB40	Q9NUA8	1239 aa		12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	TMEM39A	Q9NV64	488 aa		12.83	□□□□□ -0.36
GIT1-215	ENST00000586574	MOXD2P	A6NHM9	499 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	ATP2A1	O14983	1001 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	TIMP1	P01033	207 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	RASA1	P20936	1047 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	DNAJB2	P25686	324 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	MSL3	Q8N5Y2	521 aa	Known RBP	12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	STARD7	Q9NQZ5	370 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	CNPY2	Q9Y2B0	182 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574	SLC4A4	Q9Y6R1	1079 aa		12.82	□□□□□ -0.36
GIT1-215	ENST00000586574		F5H6K3	240 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	CTAGE5	O15320	804 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	RAB11FIP3	O75154	756 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	DUSP11	O75319	330 aa	Known RBP	12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	CST5	P28325	142 aa	Predicted RBP	12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	COPB2	P35606	906 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	KLRC3	Q07444	240 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	SBK1	Q52WX2	424 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	TMEM240	Q5SV17	173 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	STRBP	Q96SI9	672 aa	Known RBP	12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	SLF1	Q9BQI6	1058 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	TEX13B	Q9BXU2	312 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	KATNBL1	Q9H079	304 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	GOPC	Q9HD26	462 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	NYAP2	Q9P242	653 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	FAM184B	Q9ULE4	1060 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	SYNGAP1	Q96PV0	1343 aa		12.81	□□□□□ -0.36
GIT1-215	ENST00000586574	IGKV6D-41	A0A0C4DH26	115 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	GSG1L2	A8MUP6	293 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	GRXCR1	A8MXD5	290 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	DCDC2C	A8MYV0	355 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	NDUFB10	O96000	172 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	PBX2	P40425	430 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	SNRNP48	Q6IEG0	339 aa	Known RBP	12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	MFSD5	Q6N075	450 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	PRPF38A	Q8NAV1	312 aa	Known RBP	12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	NUP133	Q8WUM0	1156 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	UPF3A	Q9H1J1	476 aa	Known RBP	12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	ZNF576	Q9H609	170 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	ELP1	O95163	1332 aa		12.8	□□□□□ -0.36
GIT1-215	ENST00000586574	RAD21	O60216	631 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	ASGR1	P07306	291 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	GJA9	P57773	515 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	NKX3-2	P78367	333 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	ACVR2B	Q13705	512 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	MKL1	Q969V6	931 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	TIFA	Q96CG3	184 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	DDX11	Q96FC9	970 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	PBX4	Q9BYU1	374 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	BCL11A	Q9H165	835 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	SLC38A10	Q9HBR0	1119 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	COG6	Q9Y2V7	657 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	CHD9	Q3L8U1	2897 aa		12.79	□□□□□ -0.36
GIT1-215	ENST00000586574	MYH7	P12883	1935 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	ARVCF	O00192	962 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	HMMR	O75330	724 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	CSF2RA	P15509	400 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	CCDC144B	Q3MJ40	725 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	FAM126B	Q8IXS8	530 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	AMOTL1	Q8IY63	956 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	CPXCR1	Q8N123	301 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	STK11IP	Q8N1F8	1099 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	SYMPK	Q92797	1274 aa	Known RBP	12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	OSBP2	Q969R2	916 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	ABHD16B	Q9H3Z7	469 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	RAVER2	Q9HCJ3	691 aa	Known RBP	12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	ASTN1	O14525	1302 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	MCM3AP	O60318	1980 aa		12.78	□□□□□ -0.36
GIT1-215	ENST00000586574	CD4	P01730	458 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	C6orf222	P0C671	652 aa	Predicted RBP	12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	ACR	P10323	421 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	ADGRE1	Q14246	886 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	TJAP1	Q5JTD0	557 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	GIMAP6	Q6P9H5	292 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	ZNF365	Q70YC5	407 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	ARMCX2	Q7L311	632 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	PCSK9	Q8NBP7	692 aa	Known RBP	12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	GLT1D1	Q96MS3	346 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	CLIP2	Q9UDT6	1046 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	DDX19B	Q9UMR2	479 aa		12.77	□□□□□ -0.37
GIT1-215	ENST00000586574	MYO9B	Q13459	2157 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms