RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 SEC62Q99442 399 aaKnown RBP24.03■■□□□ 1.44
CLPTM1-204ENST00000585961 EPB41L4AQ9HCS5 686 aaPredicted RBP24.03■■□□□ 1.44
CLPTM1-204ENST00000585961 CNPY2Q9Y2B0 182 aa24.03■■□□□ 1.44
CLPTM1-204ENST00000585961 PATL2C9JE40 543 aaKnown RBP24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 PQBP1O60828 265 aaKnown RBP24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 ZBED4O75132 1171 aa24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 SNAI1O95863 264 aaPredicted RBP24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 IRX5P78411 483 aaPredicted RBP24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 FAM109BQ6ICB4 259 aaPredicted RBP24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 TEX13BQ9BXU2 312 aa24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 NRBP1Q9UHY1 535 aa24.02■■□□□ 1.44
CLPTM1-204ENST00000585961 AKR1A1P14550 325 aa24.01■■□□□ 1.43
CLPTM1-204ENST00000585961 COPB2P35606 906 aa24.01■■□□□ 1.43
CLPTM1-204ENST00000585961 CEP95Q96GE4 821 aa24.01■■□□□ 1.43
CLPTM1-204ENST00000585961 ZHX1Q9UKY1 873 aaPredicted RBP24.01■■□□□ 1.43
CLPTM1-204ENST00000585961 TACC3Q9Y6A5 838 aa24.01■■□□□ 1.43
CLPTM1-204ENST00000585961 A0A1W2PQ45 241 aaPredicted RBP24■■□□□ 1.43
CLPTM1-204ENST00000585961 A0A1W2PQY0 241 aa24■■□□□ 1.43
CLPTM1-204ENST00000585961 ZNF697Q5TEC3 545 aa24■■□□□ 1.43
CLPTM1-204ENST00000585961 IFNL3Q8IZI9 196 aa24■■□□□ 1.43
CLPTM1-204ENST00000585961 LRRC47Q8N1G4 583 aaKnown RBP24■■□□□ 1.43
CLPTM1-204ENST00000585961 SEMA6BQ9H3T3 888 aa24■■□□□ 1.43
CLPTM1-204ENST00000585961 FAM184BQ9ULE4 1060 aa24■■□□□ 1.43
CLPTM1-204ENST00000585961 ISY1Q9ULR0 285 aaKnown RBP24■■□□□ 1.43
CLPTM1-204ENST00000585961 MYH8P13535 1937 aa24■■□□□ 1.43
CLPTM1-204ENST00000585961 A0A0G2JMZ2 1700 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 ZNF236Q9UL36 1845 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 IGKV6D-41A0A0C4DH26 115 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 CLTBP09497 229 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 EPHB4P54760 987 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 KCNA10Q16322 511 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 C1orf53Q5VUE5 145 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 TMEM39AQ9NV64 488 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 MTMR4Q9NYA4 1195 aa23.99■■□□□ 1.43
CLPTM1-204ENST00000585961 ZFYP08048 801 aaPredicted RBP23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 GNAT2P19087 354 aa23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 ANKRD35Q8N283 1001 aa23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 OTUD7AQ8TE49 926 aaPredicted RBP23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 MKL1Q969V6 931 aa23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 VTI1AQ96AJ9 217 aa23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 CDX2Q99626 313 aaPredicted RBP23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 FEM1BQ9UK73 627 aa23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 COL11A1P12107 1806 aaPredicted RBP23.98■■□□□ 1.43
CLPTM1-204ENST00000585961 DNAJC25-GNG10A0A024R161 153 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 ADAMTS4O75173 837 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 RAG1P15918 1043 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 ACLYP53396 1101 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 TFAP4Q01664 338 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 SLFN13Q68D06 897 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 INCENPQ9NQS7 918 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 HOMER2Q9NSB8 354 aa23.97■■□□□ 1.43
CLPTM1-204ENST00000585961 MYADML2A6NDP7 307 aa23.96■■□□□ 1.43
CLPTM1-204ENST00000585961 TTLL1O95922 423 aa23.96■■□□□ 1.43
CLPTM1-204ENST00000585961 ACVR2BQ13705 512 aa23.96■■□□□ 1.43
CLPTM1-204ENST00000585961 SLC38A10Q9HBR0 1119 aa23.96■■□□□ 1.43
CLPTM1-204ENST00000585961 ZNF287Q9HBT7 754 aa23.96■■□□□ 1.43
CLPTM1-204ENST00000585961 STARD7Q9NQZ5 370 aa23.96■■□□□ 1.43
CLPTM1-204ENST00000585961 PCDHB15Q9Y5E8 787 aa23.96■■□□□ 1.43
CLPTM1-204ENST00000585961 SYNRGQ9UMZ2 1314 aa23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 TSPY3P0CV98 308 aa23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 TSPY8P0CW00 308 aa23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 FAAP100Q0VG06 881 aa23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 MAMDC4Q6UXC1 1216 aa23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 KLHDC9Q8NEP7 349 aa23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 TSEN34Q9BSV6 310 aaKnown RBP23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.95■■□□□ 1.42
CLPTM1-204ENST00000585961 SYNGAP1Q96PV0 1343 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 TMEM232C9JQI7 657 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 ATP2A1O14983 1001 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 KIAA0355O15063 1070 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 BMP3P12645 472 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 SNAP25P60880 206 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 CNTN2Q02246 1040 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 MSL3Q8N5Y2 521 aaKnown RBP23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 NEDD1Q8NHV4 660 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 NUP133Q8WUM0 1156 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 NACAP1Q9BZK3 213 aa23.94■■□□□ 1.42
CLPTM1-204ENST00000585961 DCDC2CA8MYV0 355 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 ADCY6O43306 1168 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 MCCP23508 829 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 PDE4BQ07343 736 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 IKQ13123 557 aaPredicted RBP23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 CCDC144BQ3MJ40 725 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 MYLIPQ8WY64 445 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 RNPC3Q96LT9 517 aaKnown RBP23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 FGD4Q96M96 766 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 AGBL1Q96MI9 1066 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 FSD1Q9BTV5 496 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 NAPBQ9H115 298 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 TTYH1Q9H313 450 aaPredicted RBP23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 MTMR7Q9Y216 660 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 PARP14Q460N5 1801 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 UNC80Q8N2C7 3258 aa23.93■■□□□ 1.42
CLPTM1-204ENST00000585961 MYH7P12883 1935 aa23.92■■□□□ 1.42
CLPTM1-204ENST00000585961 ROBO3Q96MS0 1386 aa23.92■■□□□ 1.42
CLPTM1-204ENST00000585961 DUSP11O75319 330 aaKnown RBP23.92■■□□□ 1.42
CLPTM1-204ENST00000585961 C6orf222P0C671 652 aaPredicted RBP23.92■■□□□ 1.42
CLPTM1-204ENST00000585961 SMAD3P84022 425 aaKnown RBP23.92■■□□□ 1.42
CLPTM1-204ENST00000585961 LRRFIP1Q32MZ4 808 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms