RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	CWC27	Q6UX04	472 aa	Known RBP	19.53	■□□□□ 0.72
CIRBP-204	ENST00000585630	DIS3L	Q8TF46	1054 aa	Known RBP	19.53	■□□□□ 0.72
CIRBP-204	ENST00000585630	SLC5A4	Q9NY91	659 aa		19.53	■□□□□ 0.72
CIRBP-204	ENST00000585630	FEM1B	Q9UK73	627 aa		19.53	■□□□□ 0.72
CIRBP-204	ENST00000585630	MCM3AP	O60318	1980 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	BMP3	P12645	472 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	CYBA	P13498	195 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	CYP2C19	P33261	490 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	MNX1	P50219	401 aa	Predicted RBP	19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	HAND2	P61296	217 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	SNRNP48	Q6IEG0	339 aa	Known RBP	19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	NECAB2	Q7Z6G3	386 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	TBC1D10C	Q8IV04	446 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	STAG1	Q8WVM7	1258 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	PAWR	Q96IZ0	340 aa	Known RBP	19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	MMP19	Q99542	508 aa		19.52	■□□□□ 0.72
CIRBP-204	ENST00000585630	STAT2	P52630	851 aa		19.51	■□□□□ 0.71
CIRBP-204	ENST00000585630	LHX8	Q68G74	356 aa		19.51	■□□□□ 0.71
CIRBP-204	ENST00000585630	KIFC2	Q96AC6	838 aa		19.51	■□□□□ 0.71
CIRBP-204	ENST00000585630	MAML3	Q96JK9	1138 aa		19.51	■□□□□ 0.71
CIRBP-204	ENST00000585630	SLC38A10	Q9HBR0	1119 aa		19.51	■□□□□ 0.71
CIRBP-204	ENST00000585630	TOMM22	Q9NS69	142 aa		19.51	■□□□□ 0.71
CIRBP-204	ENST00000585630	LRRC37A2	A6NM11	1700 aa		19.51	■□□□□ 0.71
CIRBP-204	ENST00000585630	DNAH12	Q6ZR08	3092 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630		H0YGN5	161 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	MSC	O60682	206 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	SLC1A4	P43007	532 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	OAZ1	P54368	228 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	KCTD2	Q14681	263 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	RRP12	Q5JTH9	1297 aa	Known RBP	19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	AKNAD1	Q5T1N1	836 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	DSCC1	Q9BVC3	393 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	NR2E3	Q9Y5X4	410 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	LCT	P09848	1927 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	NEDD4	P46934	1319 aa		19.5	■□□□□ 0.71
CIRBP-204	ENST00000585630	PLA2G6	O60733	806 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	ZBED4	O75132	1171 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	FDX1	P10109	184 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	RASGRP2	Q7LDG7	609 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	FAM160B2	Q86V87	743 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	TRPV1	Q8NER1	839 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	RNF41	Q9H4P4	317 aa	Predicted RBP	19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	TCP11L1	Q9NUJ3	509 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	DDX20	Q9UHI6	824 aa	Known RBP	19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	ISY1	Q9ULR0	285 aa	Known RBP	19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	RIPK3	Q9Y572	518 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	SMCHD1	A6NHR9	2005 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	RAD50	Q92878	1312 aa		19.49	■□□□□ 0.71
CIRBP-204	ENST00000585630	TMEM232	C9JQI7	657 aa		19.48	■□□□□ 0.71
CIRBP-204	ENST00000585630	MFSD6	Q6ZSS7	791 aa		19.48	■□□□□ 0.71
CIRBP-204	ENST00000585630	CPXCR1	Q8N123	301 aa		19.48	■□□□□ 0.71
CIRBP-204	ENST00000585630	C11orf49	Q9H6J7	331 aa		19.48	■□□□□ 0.71
CIRBP-204	ENST00000585630	DIS3	Q9Y2L1	958 aa	Known RBP	19.48	■□□□□ 0.71
CIRBP-204	ENST00000585630	CTDP1	Q9Y5B0	961 aa	Predicted RBP	19.48	■□□□□ 0.71
CIRBP-204	ENST00000585630	PFAS	O15067	1338 aa		19.48	■□□□□ 0.71
CIRBP-204	ENST00000585630	TRIOBP	Q9H2D6	2365 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	RANBP2	P49792	3224 aa	Known RBP	19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	PGK2	P07205	417 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	MCC	P23508	829 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	NT5C2	P49902	561 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	ZNF792	Q3KQV3	632 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	CHURC1	Q8WUH1	139 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	DCAF4	Q8WV16	495 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	IL25	Q9H293	177 aa		19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	RAVER2	Q9HCJ3	691 aa	Known RBP	19.47	■□□□□ 0.71
CIRBP-204	ENST00000585630	ZNF213	O14771	459 aa		19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	EVI5	O60447	810 aa		19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	TOP1	P11387	765 aa	Known RBP	19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	COL6A1	P12109	1028 aa		19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	CNGA1	P29973	690 aa		19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	IK	Q13123	557 aa	Predicted RBP	19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	HABP4	Q5JVS0	413 aa	Known RBP	19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	RCSD1	Q6JBY9	416 aa		19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	KCTD1	Q719H9	257 aa		19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	ESR2	Q92731	530 aa		19.46	■□□□□ 0.71
CIRBP-204	ENST00000585630	MYH6	P13533	1939 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	DNAJC25-GNG10	A0A024R161	153 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	SEPT4	O43236	478 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	CCDC96	Q2M329	555 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	CHST13	Q8NET6	341 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	TMEM47	Q9BQJ4	181 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	TINF2	Q9BSI4	451 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	FBXO40	Q9UH90	709 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	NRBP1	Q9UHY1	535 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	ZNF536	O15090	1300 aa		19.45	■□□□□ 0.7
CIRBP-204	ENST00000585630	IMMT	Q16891	758 aa	Known RBP	19.44	■□□□□ 0.7
CIRBP-204	ENST00000585630	CHMP4C	Q96CF2	233 aa		19.44	■□□□□ 0.7
CIRBP-204	ENST00000585630	PRR12	Q9ULL5	1215 aa		19.44	■□□□□ 0.7
CIRBP-204	ENST00000585630	COLQ	Q9Y215	455 aa	Predicted RBP	19.44	■□□□□ 0.7
CIRBP-204	ENST00000585630	MTMR7	Q9Y216	660 aa		19.44	■□□□□ 0.7
CIRBP-204	ENST00000585630	MSL3	Q8N5Y2	521 aa	Known RBP	19.43	■□□□□ 0.7
CIRBP-204	ENST00000585630	DDX11	Q96FC9	970 aa		19.43	■□□□□ 0.7
CIRBP-204	ENST00000585630	TTC14	Q96N46	770 aa		19.43	■□□□□ 0.7
CIRBP-204	ENST00000585630	CTNNA3	Q9UI47	895 aa		19.43	■□□□□ 0.7
CIRBP-204	ENST00000585630	SYNGAP1	Q96PV0	1343 aa		19.43	■□□□□ 0.7
CIRBP-204	ENST00000585630	DNM1L	O00429	736 aa		19.42	■□□□□ 0.7
CIRBP-204	ENST00000585630	PDHB	P11177	359 aa		19.42	■□□□□ 0.7
CIRBP-204	ENST00000585630	SLC4A3	P48751	1232 aa		19.42	■□□□□ 0.7
CIRBP-204	ENST00000585630	BTNL9	Q6UXG8	535 aa		19.42	■□□□□ 0.7

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