RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 CDH23Q9H251 3354 aa12.48□□□□□ -0.41
CASC3-210ENST00000584997 MCM3APO60318 1980 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
CASC3-210ENST00000584997 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 SYNRGQ9UMZ2 1314 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 ADAMTS4O75173 837 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 ACLYP53396 1101 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 EPHB4P54760 987 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 SNRNP48Q6IEG0 339 aaKnown RBP12.47□□□□□ -0.41
CASC3-210ENST00000584997 ZSCAN25Q6NSZ9 544 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
CASC3-210ENST00000584997 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 TOX2Q96NM4 488 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 TEX13BQ9BXU2 312 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 ZHX1Q9UKY1 873 aaPredicted RBP12.47□□□□□ -0.41
CASC3-210ENST00000584997 FAM184BQ9ULE4 1060 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 DDX19BQ9UMR2 479 aa12.47□□□□□ -0.41
CASC3-210ENST00000584997 CTDP1Q9Y5B0 961 aaPredicted RBP12.47□□□□□ -0.41
CASC3-210ENST00000584997 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
CASC3-210ENST00000584997 MOXD2PA6NHM9 499 aa12.46□□□□□ -0.41
CASC3-210ENST00000584997 CHGBP05060 677 aa12.46□□□□□ -0.41
CASC3-210ENST00000584997 DNAJB2P25686 324 aa12.46□□□□□ -0.41
CASC3-210ENST00000584997 ANKRD33Q7Z3H0 272 aa12.46□□□□□ -0.41
CASC3-210ENST00000584997 SIRT2Q8IXJ6 389 aa12.46□□□□□ -0.41
CASC3-210ENST00000584997 NUP88Q99567 741 aaPredicted RBP12.46□□□□□ -0.41
CASC3-210ENST00000584997 PUS7LQ9H0K6 701 aaKnown RBP12.46□□□□□ -0.41
CASC3-210ENST00000584997 COG6Q9Y2V7 657 aa12.46□□□□□ -0.41
CASC3-210ENST00000584997 MROH7Q68CQ1 1323 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
CASC3-210ENST00000584997 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
CASC3-210ENST00000584997 SNAI1O95863 264 aaPredicted RBP12.45□□□□□ -0.42
CASC3-210ENST00000584997 FAAP100Q0VG06 881 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 KCNA10Q16322 511 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 CPXCR1Q8N123 301 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 PRPF38AQ8NAV1 312 aaKnown RBP12.45□□□□□ -0.42
CASC3-210ENST00000584997 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
CASC3-210ENST00000584997 VTI1AQ96AJ9 217 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 GLT1D1Q96MS3 346 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 CHMP4BQ9H444 224 aaKnown RBP12.45□□□□□ -0.42
CASC3-210ENST00000584997 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 SPC25Q9HBM1 224 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 ZBTB40Q9NUA8 1239 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
CASC3-210ENST00000584997 F5H6K3 240 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 ZBED4O75132 1171 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 DUSP11O75319 330 aaKnown RBP12.44□□□□□ -0.42
CASC3-210ENST00000584997 NDUFB10O96000 172 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 TIMP1P01033 207 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 C6orf222P0C671 652 aaPredicted RBP12.44□□□□□ -0.42
CASC3-210ENST00000584997 RASA1P20936 1047 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 KLRC3Q07444 240 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 MAMDC4Q6UXC1 1216 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 PCSK9Q8NBP7 692 aaKnown RBP12.44□□□□□ -0.42
CASC3-210ENST00000584997 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.421e-12■□□□□ 9.7
CASC3-210ENST00000584997 ZNF576Q9H609 170 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 RIPK3Q9Y572 518 aa12.44□□□□□ -0.42
CASC3-210ENST00000584997 ELP1O95163 1332 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 DNAJC25-GNG10A0A024R161 153 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 MYADML2A6NDP7 307 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 CST5P28325 142 aaPredicted RBP12.43□□□□□ -0.42
CASC3-210ENST00000584997 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.422e-10■□□□□ 9.7
CASC3-210ENST00000584997 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 MFSD5Q6N075 450 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
CASC3-210ENST00000584997 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 KLHDC9Q8NEP7 349 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 KIFC2Q96AC6 838 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 TIFAQ96CG3 184 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.43□□□□□ -0.42
CASC3-210ENST00000584997 LRRCC1Q9C099 1032 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 ABHD16BQ9H3Z7 469 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 RAVER2Q9HCJ3 691 aaKnown RBP12.43□□□□□ -0.42
CASC3-210ENST00000584997 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
CASC3-210ENST00000584997 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 TBX21Q9UL17 535 aa12.43□□□□□ -0.42
CASC3-210ENST00000584997 ATP2A1O14983 1001 aa12.42□□□□□ -0.42
CASC3-210ENST00000584997 ASGR1P07306 291 aa12.42□□□□□ -0.42
CASC3-210ENST00000584997 CCDC144BQ3MJ40 725 aa12.42□□□□□ -0.42
CASC3-210ENST00000584997 CCSAPQ6IQ19 270 aaPredicted RBP12.42□□□□□ -0.42
CASC3-210ENST00000584997 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
CASC3-210ENST00000584997 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
CASC3-210ENST00000584997 STRBPQ96SI9 672 aaKnown RBP12.42□□□□□ -0.42
CASC3-210ENST00000584997 GAS2L1Q99501 681 aaPredicted RBP12.42□□□□□ -0.42
CASC3-210ENST00000584997 ZNF287Q9HBT7 754 aa12.42□□□□□ -0.42
CASC3-210ENST00000584997 CLIP2Q9UDT6 1046 aa12.42□□□□□ -0.42
CASC3-210ENST00000584997 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
CASC3-210ENST00000584997 SPTBN5Q9NRC6 3674 aaKnown RBP12.42□□□□□ -0.42
CASC3-210ENST00000584997 A0A0U1RQG5 324 aaPredicted RBP12.41□□□□□ -0.42
CASC3-210ENST00000584997 GSG1L2A8MUP6 293 aa12.41□□□□□ -0.42
CASC3-210ENST00000584997 TLR3O15455 904 aaKnown RBP12.41□□□□□ -0.42
CASC3-210ENST00000584997 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
CASC3-210ENST00000584997 TDO2P48775 406 aa12.41□□□□□ -0.42
CASC3-210ENST00000584997 IRX5P78411 483 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms