RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ZNF236Q9UL36 1845 aa21.15■□□□□ 0.98
ERBB2-221ENST00000584888 COL11A1P12107 1806 aaPredicted RBP21.14■□□□□ 0.97
ERBB2-221ENST00000584888 F5H6K3 240 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 TSPY3P0CV98 308 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 TSPY8P0CW00 308 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 STAT3P40763 770 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 NOVP48745 357 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 KLRC3Q07444 240 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 RIOX2Q8IUF8 465 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 NUP88Q99567 741 aaPredicted RBP21.14■□□□□ 0.97
ERBB2-221ENST00000584888 SENP6Q9GZR1 1112 aaPredicted RBP21.14■□□□□ 0.97
ERBB2-221ENST00000584888 IL17RBQ9NRM6 502 aa21.14■□□□□ 0.97
ERBB2-221ENST00000584888 TTLL1O95922 423 aa21.13■□□□□ 0.97
ERBB2-221ENST00000584888 NDUFB10O96000 172 aa21.13■□□□□ 0.97
ERBB2-221ENST00000584888 PRAMEF19Q5SWL8 479 aa21.13■□□□□ 0.97
ERBB2-221ENST00000584888 MAML3Q96JK9 1138 aa21.13■□□□□ 0.97
ERBB2-221ENST00000584888 MMP19Q99542 508 aa21.13■□□□□ 0.97
ERBB2-221ENST00000584888 IL25Q9H293 177 aa21.13■□□□□ 0.97
ERBB2-221ENST00000584888 ZNF214Q9UL59 606 aaPredicted RBP21.13■□□□□ 0.97
ERBB2-221ENST00000584888 DNM1LO00429 736 aa21.12■□□□□ 0.97
ERBB2-221ENST00000584888 MAGEA10P43363 369 aaPredicted RBP21.12■□□□□ 0.97
ERBB2-221ENST00000584888 GMCL1P1Q8NEA9 526 aa21.12■□□□□ 0.97
ERBB2-221ENST00000584888 REPS2Q8NFH8 660 aa21.12■□□□□ 0.97
ERBB2-221ENST00000584888 LAMA4Q16363 1823 aa21.12■□□□□ 0.97
ERBB2-221ENST00000584888 SOX1O00570 391 aaPredicted RBP21.11■□□□□ 0.97
ERBB2-221ENST00000584888 SEPT4O43236 478 aa21.11■□□□□ 0.97
ERBB2-221ENST00000584888 KCTD2Q14681 263 aa21.11■□□□□ 0.97
ERBB2-221ENST00000584888 ANO1Q5XXA6 986 aa21.11■□□□□ 0.97
ERBB2-221ENST00000584888 ARRDC4Q8NCT1 418 aa21.11■□□□□ 0.97
ERBB2-221ENST00000584888 SLF1Q9BQI6 1058 aa21.11■□□□□ 0.97
ERBB2-221ENST00000584888 DSCC1Q9BVC3 393 aa21.11■□□□□ 0.97
ERBB2-221ENST00000584888 ZNFX1Q9P2E3 1918 aaKnown RBP21.11■□□□□ 0.97
ERBB2-221ENST00000584888 PGK2P07205 417 aa21.1■□□□□ 0.97
ERBB2-221ENST00000584888 COPB2P35606 906 aa21.1■□□□□ 0.97
ERBB2-221ENST00000584888 GJC2Q5T442 439 aaPredicted RBP21.1■□□□□ 0.97
ERBB2-221ENST00000584888 STAG1Q8WVM7 1258 aa21.1■□□□□ 0.97
ERBB2-221ENST00000584888 TCP11L1Q9NUJ3 509 aa21.1■□□□□ 0.97
ERBB2-221ENST00000584888 FRMPD3Q5JV73 1810 aa21.1■□□□□ 0.97
ERBB2-221ENST00000584888 TSPY2A6NKD2 308 aa21.09■□□□□ 0.97
ERBB2-221ENST00000584888 RANBP6O60518 1105 aaKnown RBP21.09■□□□□ 0.97
ERBB2-221ENST00000584888 NMT2O60551 498 aa21.09■□□□□ 0.97
ERBB2-221ENST00000584888 PCP11498 1178 aaKnown RBP21.09■□□□□ 0.97
ERBB2-221ENST00000584888 CHMLP26374 656 aa21.09■□□□□ 0.97
ERBB2-221ENST00000584888 ATN1P54259 1190 aaPredicted RBP21.09■□□□□ 0.97
ERBB2-221ENST00000584888 HAND2P61296 217 aa21.09■□□□□ 0.97
ERBB2-221ENST00000584888 PPP4R3BQ5MIZ7 849 aa21.09■□□□□ 0.97
ERBB2-221ENST00000584888 AKNAD1Q5T1N1 836 aa21.09■□□□□ 0.97
ERBB2-221ENST00000584888 TBC1D10CQ8IV04 446 aa21.09■□□□□ 0.97
ERBB2-221ENST00000584888 PRPF38AQ8NAV1 312 aaKnown RBP21.09■□□□□ 0.97
ERBB2-221ENST00000584888 DIS3Q9Y2L1 958 aaKnown RBP21.09■□□□□ 0.97
ERBB2-221ENST00000584888 ZNF792Q3KQV3 632 aa21.08■□□□□ 0.97
ERBB2-221ENST00000584888 CENPQQ7L2Z9 268 aaPredicted RBP21.08■□□□□ 0.97
ERBB2-221ENST00000584888 LRRC47Q8N1G4 583 aaKnown RBP21.08■□□□□ 0.97
ERBB2-221ENST00000584888 LRCH3Q96II8 777 aa21.08■□□□□ 0.97
ERBB2-221ENST00000584888 TEX13BQ9BXU2 312 aa21.08■□□□□ 0.97
ERBB2-221ENST00000584888 SLFN13Q68D06 897 aa21.07■□□□□ 0.96
ERBB2-221ENST00000584888 TINF2Q9BSI4 451 aa21.07■□□□□ 0.96
ERBB2-221ENST00000584888 UBE2OQ9C0C9 1292 aaKnown RBP21.07■□□□□ 0.96
ERBB2-221ENST00000584888 NRBP1Q9UHY1 535 aa21.07■□□□□ 0.96
ERBB2-221ENST00000584888 RIPK3Q9Y572 518 aa21.07■□□□□ 0.96
ERBB2-221ENST00000584888 RAD50Q92878 1312 aa21.06■□□□□ 0.96
ERBB2-221ENST00000584888 SZT2Q5T011 3432 aa21.06■□□□□ 0.96
ERBB2-221ENST00000584888 KBTBD13C9JR72 458 aa21.06■□□□□ 0.96
ERBB2-221ENST00000584888 ZNF213O14771 459 aa21.06■□□□□ 0.96
ERBB2-221ENST00000584888 MYCNP04198 464 aaPredicted RBP21.06■□□□□ 0.96
ERBB2-221ENST00000584888 SNRNP48Q6IEG0 339 aaKnown RBP21.06■□□□□ 0.96
ERBB2-221ENST00000584888 MFSD6Q6ZSS7 791 aa21.06■□□□□ 0.96
ERBB2-221ENST00000584888 KIFC2Q96AC6 838 aa21.06■□□□□ 0.96
ERBB2-221ENST00000584888 GMCL1Q96IK5 515 aa21.06■□□□□ 0.96
ERBB2-221ENST00000584888 ATP2A1O14983 1001 aa21.05■□□□□ 0.96
ERBB2-221ENST00000584888 ZBED4O75132 1171 aa21.05■□□□□ 0.96
ERBB2-221ENST00000584888 MDM2Q00987 491 aaPredicted RBP21.05■□□□□ 0.96
ERBB2-221ENST00000584888 TDHQ8IZJ6 230 aa21.05■□□□□ 0.96
ERBB2-221ENST00000584888 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
ERBB2-221ENST00000584888 RNF41Q9H4P4 317 aaPredicted RBP21.05■□□□□ 0.96
ERBB2-221ENST00000584888 FEM1BQ9UK73 627 aa21.05■□□□□ 0.96
ERBB2-221ENST00000584888 STX8Q9UNK0 236 aa21.05■□□□□ 0.96
ERBB2-221ENST00000584888 PLA2G6O60733 806 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 BMP3P12645 472 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 TAL1P17542 331 aaPredicted RBP21.04■□□□□ 0.96
ERBB2-221ENST00000584888 SLC4A3P48751 1232 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 NT5C2P49902 561 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 RTP1P59025 263 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 LRRC41Q15345 812 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 RRP12Q5JTH9 1297 aaKnown RBP21.04■□□□□ 0.96
ERBB2-221ENST00000584888 RCSD1Q6JBY9 416 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 SLC39A5Q6ZMH5 540 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 SLC38A10Q9HBR0 1119 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 CTNNA3Q9UI47 895 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 CTDP1Q9Y5B0 961 aaPredicted RBP21.04■□□□□ 0.96
ERBB2-221ENST00000584888 NEDD4P46934 1319 aa21.04■□□□□ 0.96
ERBB2-221ENST00000584888 SGSM2O43147 1006 aa21.03■□□□□ 0.96
ERBB2-221ENST00000584888 ADCYAP1R1P41586 468 aa21.03■□□□□ 0.96
ERBB2-221ENST00000584888 LRIT3Q3SXY7 679 aa21.03■□□□□ 0.96
ERBB2-221ENST00000584888 DDX11Q96FC9 970 aa21.03■□□□□ 0.96
ERBB2-221ENST00000584888 TTC14Q96N46 770 aa21.03■□□□□ 0.96
ERBB2-221ENST00000584888 RAVER2Q9HCJ3 691 aaKnown RBP21.03■□□□□ 0.96
ERBB2-221ENST00000584888 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
ERBB2-221ENST00000584888 SMCHD1A6NHR9 2005 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms