RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ANKRD23Q86SG2 305 aa21.26■□□□□ 0.99
RFFL-211ENST00000584541 BRI3BPQ8WY22 251 aa21.26■□□□□ 0.99
RFFL-211ENST00000584541 SLF1Q9BQI6 1058 aa21.26■□□□□ 0.99
RFFL-211ENST00000584541 LLPHQ9BRT6 129 aaKnown RBP21.26■□□□□ 0.99
RFFL-211ENST00000584541 SPZ1Q9BXG8 430 aa21.26■□□□□ 0.99
RFFL-211ENST00000584541 UBA5Q9GZZ9 404 aa21.26■□□□□ 0.99
RFFL-211ENST00000584541 PNMA3Q9UL41 463 aa21.26■□□□□ 0.99
RFFL-211ENST00000584541 SLC45A1Q9Y2W3 748 aa21.26■□□□□ 0.99
RFFL-211ENST00000584541 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.26■□□□□ 0.99
RFFL-211ENST00000584541 HSPA6P17066 643 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 IFNAR1P17181 557 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 SLC16A2P36021 539 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 AKAP17AQ02040 695 aaKnown RBP21.25■□□□□ 0.99
RFFL-211ENST00000584541 COG2Q14746 738 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 SYDE2Q5VT97 1194 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 OTUD7BQ6GQQ9 843 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 SAMD1Q6SPF0 538 aaPredicted RBP21.25■□□□□ 0.99
RFFL-211ENST00000584541 REM2Q8IYK8 340 aaPredicted RBP21.25■□□□□ 0.99
RFFL-211ENST00000584541 TRIM22Q8IYM9 498 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 CCDC82Q8N4S0 544 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 SRBD1Q8N5C6 995 aaKnown RBP21.25■□□□□ 0.99
RFFL-211ENST00000584541 PRPF38AQ8NAV1 312 aaKnown RBP21.25■□□□□ 0.99
RFFL-211ENST00000584541 KIFC2Q96AC6 838 aa21.25■□□□□ 0.99
RFFL-211ENST00000584541 DAXXQ9UER7 740 aaPredicted RBP21.25■□□□□ 0.99
RFFL-211ENST00000584541 RLFQ13129 1914 aa21.24■□□□□ 0.99
RFFL-211ENST00000584541 SSRP1Q08945 709 aaKnown RBP21.24■□□□□ 0.99
RFFL-211ENST00000584541 CUL4AQ13619 759 aa21.24■□□□□ 0.99
RFFL-211ENST00000584541 GPAT2Q6NUI2 795 aa21.24■□□□□ 0.99
RFFL-211ENST00000584541 CMTR1Q8N1G2 835 aaKnown RBP21.24■□□□□ 0.99
RFFL-211ENST00000584541 VAT1LQ9HCJ6 419 aa21.24■□□□□ 0.99
RFFL-211ENST00000584541 HOXC10Q9NYD6 342 aa21.24■□□□□ 0.99
RFFL-211ENST00000584541 RBM27Q9P2N5 1060 aaKnown RBP21.24■□□□□ 0.99
RFFL-211ENST00000584541 CTDP1Q9Y5B0 961 aaPredicted RBP21.24■□□□□ 0.99
RFFL-211ENST00000584541 MYPNQ86TC9 1320 aa21.24■□□□□ 0.99
RFFL-211ENST00000584541 BTBD19C9JJ37 291 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 PDHXO00330 501 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 FDX1P10109 184 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 KIF23Q02241 960 aaPredicted RBP21.23■□□□□ 0.99
RFFL-211ENST00000584541 NTRK3Q16288 839 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 ADGRF4Q8IZF3 695 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 RRP36Q96EU6 259 aaKnown RBP21.23■□□□□ 0.99
RFFL-211ENST00000584541 CPVLQ9H3G5 476 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 RIOX1Q9H6W3 641 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 ZCCHC17Q9NP64 241 aaKnown RBP21.23■□□□□ 0.99
RFFL-211ENST00000584541 FBXO28Q9NVF7 368 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 SEC63Q9UGP8 760 aaKnown RBP21.23■□□□□ 0.99
RFFL-211ENST00000584541 PPP1R9AQ9ULJ8 1098 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 PRR12Q9ULL5 1215 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 CNTNAP5Q8WYK1 1306 aa21.23■□□□□ 0.99
RFFL-211ENST00000584541 WDR33Q9C0J8 1336 aaKnown RBP21.23■□□□□ 0.99
RFFL-211ENST00000584541 BAZ2BQ9UIF8 2168 aaKnown RBP21.23■□□□□ 0.99
RFFL-211ENST00000584541 COL11A1P12107 1806 aaPredicted RBP21.22■□□□□ 0.99
RFFL-211ENST00000584541 DSG3P32926 999 aa21.22■□□□□ 0.99
RFFL-211ENST00000584541 HTRA3P83110 453 aa21.22■□□□□ 0.99
RFFL-211ENST00000584541 ST3GAL1Q11201 340 aa21.22■□□□□ 0.99
RFFL-211ENST00000584541 NBPF11Q86T75 865 aa21.22■□□□□ 0.99
RFFL-211ENST00000584541 INTS4Q96HW7 963 aaKnown RBP21.22■□□□□ 0.99
RFFL-211ENST00000584541 SLC26A6Q9BXS9 759 aa21.22■□□□□ 0.99
RFFL-211ENST00000584541 RNF26Q9BY78 433 aaPredicted RBP21.22■□□□□ 0.99
RFFL-211ENST00000584541 ASCC2Q9H1I8 757 aaPredicted RBP21.22■□□□□ 0.99
RFFL-211ENST00000584541 PTPDC1A2A3K4 754 aa21.21■□□□□ 0.99
RFFL-211ENST00000584541 CYTH3O43739 400 aa21.21■□□□□ 0.99
RFFL-211ENST00000584541 FMNL1O95466 1100 aaPredicted RBP21.21■□□□□ 0.99
RFFL-211ENST00000584541 HMGN5P82970 282 aaKnown RBP21.21■□□□□ 0.99
RFFL-211ENST00000584541 NSUN7Q8NE18 718 aaKnown RBP21.21■□□□□ 0.99
RFFL-211ENST00000584541 PHKBQ93100 1093 aa21.21■□□□□ 0.99
RFFL-211ENST00000584541 JMJD4Q9H9V9 463 aa21.21■□□□□ 0.99
RFFL-211ENST00000584541 SMC3Q9UQE7 1217 aa21.21■□□□□ 0.99
RFFL-211ENST00000584541 STK36Q9NRP7 1315 aa21.21■□□□□ 0.99
RFFL-211ENST00000584541 PRPF3O43395 683 aaKnown RBP21.2■□□□□ 0.98
RFFL-211ENST00000584541 AOC2O75106 756 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 ZBED4O75132 1171 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 CTDNEP1O95476 244 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 MAP2K2P36507 400 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 TM4SF4P48230 202 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 VEGFBP49765 207 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 FUT2Q10981 343 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 HOMER1Q86YM7 354 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 IFNL1Q8IU54 200 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 FAM43AQ8N2R8 423 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 GTF3C2Q8WUA4 911 aaPredicted RBP21.2■□□□□ 0.98
RFFL-211ENST00000584541 PIBF1Q8WXW3 757 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 PARK7Q99497 189 aaKnown RBP21.2■□□□□ 0.98
RFFL-211ENST00000584541 PTPN18Q99952 460 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 KIF3AQ9Y496 699 aa21.2■□□□□ 0.98
RFFL-211ENST00000584541 V9GY48 417 aaPredicted RBP21.2■□□□□ 0.98
RFFL-211ENST00000584541 A0A0G2JMZ2 1700 aa21.19■□□□□ 0.98
RFFL-211ENST00000584541 SPDYE16A6NNV3 312 aaPredicted RBP21.19■□□□□ 0.98
RFFL-211ENST00000584541 DEXIO95424 95 aa21.19■□□□□ 0.98
RFFL-211ENST00000584541 CDC37Q16543 378 aaPredicted RBP21.19■□□□□ 0.98
RFFL-211ENST00000584541 MB21D1Q8N884 522 aa21.19■□□□□ 0.98
RFFL-211ENST00000584541 SMCR8Q8TEV9 937 aaPredicted RBP21.19■□□□□ 0.98
RFFL-211ENST00000584541 WASF1Q92558 559 aa21.19■□□□□ 0.98
RFFL-211ENST00000584541 ATG4CQ96DT6 458 aa21.19■□□□□ 0.98
RFFL-211ENST00000584541 PIGSQ96S52 555 aa21.19■□□□□ 0.98
RFFL-211ENST00000584541 P2RX7Q99572 595 aaKnown RBP21.19■□□□□ 0.98
RFFL-211ENST00000584541 ORC3Q9UBD5 711 aaPredicted RBP21.19■□□□□ 0.98
RFFL-211ENST00000584541 PNMA6FA0A0J9YX94 578 aa21.18■□□□□ 0.98
RFFL-211ENST00000584541 IGF2BP3O00425 579 aaKnown RBP eCLIP21.18■□□□□ 0.98
RFFL-211ENST00000584541 ZBTB5O15062 677 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms