RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 LMNB1P20700 586 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 RPS12P25398 132 aaKnown RBP6.84□□□□□ -1.31
MSI2-219ENST00000584476 VARSP26640 1264 aaKnown RBP6.84□□□□□ -1.31
MSI2-219ENST00000584476 GJB2P29033 226 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 CDC27P30260 824 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 ZNF280AP59817 542 aaPredicted RBP6.84□□□□□ -1.31
MSI2-219ENST00000584476 TFAP4Q01664 338 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 GABPAQ06546 454 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 WTAPQ15007 396 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 RAB3GAP1Q15042 981 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 NBPF9Q3BBW0 867 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 SH3D19Q5HYK7 790 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 APOA5Q6Q788 366 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 TTC6Q86TZ1 520 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 SGMS1Q86VZ5 419 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 CCDC144CPQ8IYA2 1237 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 ENAHQ8N8S7 591 aaPredicted RBP6.84□□□□□ -1.31
MSI2-219ENST00000584476 MTMR14Q8NCE2 650 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 NSUN7Q8NE18 718 aaKnown RBP6.84□□□□□ -1.31
MSI2-219ENST00000584476 PRR7Q8TB68 274 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 BAP1Q92560 729 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 UBAC1Q9BSL1 405 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 MKNK2Q9HBH9 465 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 GOPCQ9HD26 462 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 MYOZ2Q9NPC6 264 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 IL17RBQ9NRM6 502 aa6.84□□□□□ -1.31
MSI2-219ENST00000584476 NXF1Q9UBU9 619 aaKnown RBP6.84□□□□□ -1.31
MSI2-219ENST00000584476 ZNF70Q9UC06 446 aaPredicted RBP6.84□□□□□ -1.31
MSI2-219ENST00000584476 CNTNAP1P78357 1384 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 FOCADQ5VW36 1801 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 ASTN2O75129 1339 aaPredicted RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 ERICH2A1L162 156 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 TSPY2A6NKD2 308 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 GOLGA8AA7E2F4 631 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 WNT10BO00744 389 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 ZBTB43O43298 467 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 ENTPD3O75355 529 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 SHMT1P34896 483 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 SART3Q15020 963 aaKnown RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 FOXD4L5Q5VV16 416 aaPredicted RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 RCSD1Q6JBY9 416 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 TRIM46Q7Z4K8 759 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 MICU3Q86XE3 530 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 ZNF654Q8IZM8 581 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 ZNF444Q8N0Y2 327 aaPredicted RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 ZNF511Q8NB15 262 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 FOXD4L4Q8WXT5 416 aaPredicted RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 TNPO1Q92973 898 aaKnown RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 DDX11Q96FC9 970 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 LLPHQ9BRT6 129 aaKnown RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 MTA3Q9BTC8 594 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 EHD4Q9H223 541 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 DNAJC18Q9H819 358 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 POLR3EQ9NVU0 708 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 CNOT7Q9UIV1 285 aaKnown RBP6.83□□□□□ -1.32
MSI2-219ENST00000584476 SLC12A7Q9Y666 1083 aa6.83□□□□□ -1.32
MSI2-219ENST00000584476 PTPDC1A2A3K4 754 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 BRD1O95696 1058 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 HLA-DOAP06340 250 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 TSPY3P0CV98 308 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 TSPY8P0CW00 308 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 BMP1P13497 986 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 FDPSP14324 419 aaKnown RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 AKR1B1P15121 316 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 SYT1P21579 422 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 ADD1P35611 737 aaKnown RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 METAP2P50579 478 aaKnown RBP eCLIP6.82□□□□□ -1.32
MSI2-219ENST00000584476 NUCB2P80303 420 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 SHROOM1Q2M3G4 852 aaPredicted RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 TBC1D10BQ4KMP7 808 aaPredicted RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 IFIT1BQ5T764 474 aaKnown RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 C9orf131Q5VYM1 1079 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 IQCA1Q86XH1 822 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 CLEC10AQ8IUN9 316 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 ZSCAN29Q8IWY8 852 aaPredicted RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 TMTC2Q8N394 836 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 NEDD1Q8NHV4 660 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 NUP133Q8WUM0 1156 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 ANKS1AQ92625 1134 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 DPF2Q92785 391 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 CHAMP1Q96JM3 812 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.82□□□□□ -1.32
MSI2-219ENST00000584476 DHX36Q9H2U1 1008 aaKnown RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 VEZTQ9HBM0 779 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 ZNF287Q9HBT7 754 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 TCP11L1Q9NUJ3 509 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 TMOD2Q9NZR1 351 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 RNF181Q9P0P0 153 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 SWAP70Q9UH65 585 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 SERPINB13Q9UIV8 391 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 SCAF8Q9UPN6 1271 aaKnown RBP6.82□□□□□ -1.32
MSI2-219ENST00000584476 ECM29Q5VYK3 1845 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 MYH1P12882 1939 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 NID2Q14112 1375 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 ATRNL1Q5VV63 1379 aa6.82□□□□□ -1.32
MSI2-219ENST00000584476 SIPA1L1O43166 1804 aa6.81□□□□□ -1.32
MSI2-219ENST00000584476 COL2A1P02458 1487 aaPredicted RBP6.81□□□□□ -1.32
MSI2-219ENST00000584476 IGKV6D-41A0A0C4DH26 115 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms