RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.64	□□□□□ -0.55
EIF4A1-231	ENST00000584054	LZTS2	Q9BRK4	669 aa		11.64	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SPZ1	Q9BXG8	430 aa		11.64	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.64	□□□□□ -0.55
EIF4A1-231	ENST00000584054	FEM1B	Q9UK73	627 aa		11.64	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PPP1R9A	Q9ULJ8	1098 aa		11.64	□□□□□ -0.55
EIF4A1-231	ENST00000584054		A0A0G2JMZ2	1700 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ST18	O60284	1047 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	AOC2	O75106	756 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	LARGE1	O95461	756 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PARP1	P09874	1014 aa	Known RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	IFNAR1	P17181	557 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ATP2B2	Q01814	1243 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CUL4A	Q13619	759 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	NOM1	Q5C9Z4	860 aa	Known RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	FAM83B	Q5T0W9	1011 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	TTBK2	Q6IQ55	1244 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	1e-6	■■□□□ 13.7
EIF4A1-231	ENST00000584054	SPICE1	Q8N0Z3	855 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	JMY	Q8N9B5	988 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PRPF38A	Q8NAV1	312 aa	Known RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CHURC1	Q8WUH1	139 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GTF3C6	Q969F1	213 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	NUP88	Q99567	741 aa	Predicted RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	P2RX7	Q99572	595 aa	Known RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	FEZ1	Q99689	392 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	MYL10	Q9BUA6	226 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RANBP17	Q9H2T7	1088 aa	Known RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RBM28	Q9NW13	759 aa	Known RBP	11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	HOXC10	Q9NYD6	342 aa		11.63	□□□□□ -0.55
EIF4A1-231	ENST00000584054	KLRF2	D3W0D1	207 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PDHX	O00330	501 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	STK25	O00506	426 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CNMD	O75829	334 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CTDNEP1	O95476	244 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ALDH1A1	P00352	501 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	KIF5B	P33176	963 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ADD1	P35611	737 aa	Known RBP	11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SCRN1	Q12765	414 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	KCTD1	Q719H9	257 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SRBD1	Q8N5C6	995 aa	Known RBP	11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SLF1	Q9BQI6	1058 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	JMJD4	Q9H9V9	463 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SLC38A10	Q9HBR0	1119 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RYDEN	Q9NUL5	291 aa	Known RBP	11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	FBXO28	Q9NVF7	368 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	MORF4L1	Q9UBU8	362 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PRR12	Q9ULL5	1215 aa		11.62	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ZNF536	O15090	1300 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CCDC196	A0A1B0GTZ2	297 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	TMEM232	C9JQI7	657 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	VWA5A	O00534	786 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CA12	O43570	354 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	BCR	P11274	1271 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	METAP2	P50579	478 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	STAT2	P52630	851 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	OAZ1	P54368	228 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	HERVK_113	P62684	666 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	MKRN3	Q13064	507 aa	Known RBP	11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ZYX	Q15942	572 aa	Known RBP	11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RTN1	Q16799	776 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	C17orf99	Q6UX52	265 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SYNE3	Q6ZMZ3	975 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	NFXL1	Q6ZNB6	911 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GADL1	Q6ZQY3	521 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	MB21D1	Q8N884	522 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CTCFL	Q8NI51	663 aa	Predicted RBP	11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SMARCC2	Q8TAQ2	1214 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	TMX3	Q96JJ7	454 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	MAF1	Q9H063	256 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SAGE1	Q9NXZ1	904 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RBPJL	Q9UBG7	517 aa		11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ZNF214	Q9UL59	606 aa	Predicted RBP	11.61	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CNTNAP5	Q8WYK1	1306 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GOLGA8A	A7E2F4	631 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GOLGA8B	A8MQT2	603 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PRPF3	O43395	683 aa	Known RBP	11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	TLR2	O60603	784 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PLEKHA8P1	O95397	391 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GOLGA8H	P0CJ92	632 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RXRA	P19793	462 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	OSBP	P22059	807 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GCLC	P48506	637 aa	Predicted RBP	11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	FGD1	P98174	961 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	GHRHR	Q02643	423 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	SYDE2	Q5VT97	1194 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	OTUD7B	Q6GQQ9	843 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	MICU3	Q86XE3	530 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	ADGRF4	Q8IZF3	695 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RGS22	Q8NE09	1264 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	CHMP4C	Q96CF2	233 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	LARP6	Q9BRS8	491 aa	Known RBP	11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	LLPH	Q9BRT6	129 aa	Known RBP	11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	PNMA3	Q9UL41	463 aa		11.6	□□□□□ -0.55
EIF4A1-231	ENST00000584054	RABGAP1	Q9Y3P9	1069 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms