RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PRPF38AQ8NAV1 312 aaKnown RBP13.55□□□□□ -0.24
CDRT1-207ENST00000583965 BRI3BPQ8WY22 251 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 GPCPD1Q9NPB8 672 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 RBBP6Q7Z6E9 1792 aaKnown RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 BTBD19C9JJ37 291 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 FLOT1O75955 427 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 IFNAR1P17181 557 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 OSBPP22059 807 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 ADD1P35611 737 aaKnown RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 MAP2K2P36507 400 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 TM4SF4P48230 202 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 COG2Q14746 738 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 TREML2Q5T2D2 321 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 SYDE2Q5VT97 1194 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 SLF1Q9BQI6 1058 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 LLPHQ9BRT6 129 aaKnown RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 NCOA5Q9HCD5 579 aaKnown RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 HOXC10Q9NYD6 342 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 PPP1R9AQ9ULJ8 1098 aa13.54□□□□□ -0.24
CDRT1-207ENST00000583965 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 ZNFX1Q9P2E3 1918 aaKnown RBP13.54□□□□□ -0.24
CDRT1-207ENST00000583965 PLEKHA8P1O95397 391 aa13.53□□□□□ -0.24
CDRT1-207ENST00000583965 CUL4AQ13619 759 aa13.53□□□□□ -0.24
CDRT1-207ENST00000583965 NTRK3Q16288 839 aa13.53□□□□□ -0.24
CDRT1-207ENST00000583965 TTBK2Q6IQ55 1244 aa13.53□□□□□ -0.24
CDRT1-207ENST00000583965 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
CDRT1-207ENST00000583965 SRBD1Q8N5C6 995 aaKnown RBP13.53□□□□□ -0.24
CDRT1-207ENST00000583965 GTF3C2Q8WUA4 911 aaPredicted RBP13.53□□□□□ -0.24
CDRT1-207ENST00000583965 ASCC2Q9H1I8 757 aaPredicted RBP13.53□□□□□ -0.24
CDRT1-207ENST00000583965 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
CDRT1-207ENST00000583965 MGAMO43451 1857 aa13.53□□□□□ -0.24
CDRT1-207ENST00000583965 PDHXO00330 501 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 DSG3P32926 999 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 SLC16A2P36021 539 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 VEGFBP49765 207 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 KIF23Q02241 960 aaPredicted RBP13.52□□□□□ -0.25
CDRT1-207ENST00000583965 FUT2Q10981 343 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 GRM1Q13255 1194 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 ADGRF4Q8IZF3 695 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 MTMR8Q96EF0 704 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 INTS4Q96HW7 963 aaKnown RBP13.52□□□□□ -0.25
CDRT1-207ENST00000583965 PTPN18Q99952 460 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
CDRT1-207ENST00000583965 UBA5Q9GZZ9 404 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 FBXO28Q9NVF7 368 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 ADAMTS5Q9UNA0 930 aa13.52□□□□□ -0.25
CDRT1-207ENST00000583965 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.52□□□□□ -0.25
CDRT1-207ENST00000583965 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 CYTH3O43739 400 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 AOC2O75106 756 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 HMGN5P82970 282 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 HTRA3P83110 453 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 AKAP17AQ02040 695 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 SSRP1Q08945 709 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 MB21D1Q8N884 522 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 NSUN7Q8NE18 718 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 PARK7Q99497 189 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 JMJD4Q9H9V9 463 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
CDRT1-207ENST00000583965 PNMA2Q9UL42 364 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 CEP350Q5VT06 3117 aa13.51□□□□□ -0.25
CDRT1-207ENST00000583965 IGF2BP3O00425 579 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDRT1-207ENST00000583965 VWA5AO00534 786 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 ZBTB5O15062 677 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 PRPF3O43395 683 aaKnown RBP13.5□□□□□ -0.25
CDRT1-207ENST00000583965 ZBED4O75132 1171 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 FMNL1O95466 1100 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-207ENST00000583965 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 HERVK_113P62684 666 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 TRAF1Q13077 416 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
CDRT1-207ENST00000583965 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 P2RX7Q99572 595 aaKnown RBP13.5□□□□□ -0.25
CDRT1-207ENST00000583965 CPVLQ9H3G5 476 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 SLC38A10Q9HBR0 1119 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 CTDP1Q9Y5B0 961 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-207ENST00000583965 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
CDRT1-207ENST00000583965 PLXNB2O15031 1838 aa13.49□□□□□ -0.25
CDRT1-207ENST00000583965 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms