RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 C16orf86Q6ZW13 317 aa13.91□□□□□ -0.18
GGA3-217ENST00000583667 TTC6Q86TZ1 520 aa13.91□□□□□ -0.18
GGA3-217ENST00000583667 ATXN2LQ8WWM7 1075 aaKnown RBP13.91□□□□□ -0.18
GGA3-217ENST00000583667 C1QTNF1Q9BXJ1 281 aa13.91□□□□□ -0.18
GGA3-217ENST00000583667 ZNF341Q9BYN7 854 aa13.91□□□□□ -0.18
GGA3-217ENST00000583667 USP40Q9NVE5 1235 aa13.91□□□□□ -0.18
GGA3-217ENST00000583667 PIEZO1Q92508 2521 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 CXCL11O14625 94 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 ZBTB43O43298 467 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.18
GGA3-217ENST00000583667 CYP2D6P10635 497 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 NOVP48745 357 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 GABPAQ06546 454 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 STK3Q13188 491 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 WTAPQ15007 396 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 C9orf50Q5SZB4 431 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 LARP1BQ659C4 914 aaKnown RBP13.9□□□□□ -0.18
GGA3-217ENST00000583667 SYNE3Q6ZMZ3 975 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 DGKHQ86XP1 1220 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 ASB2Q96Q27 587 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 UHRF1Q96T88 793 aaPredicted RBP13.9□□□□□ -0.18
GGA3-217ENST00000583667 MAP3K14Q99558 947 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 ZNF112Q9UJU3 913 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 MTMR6Q9Y217 621 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 ATP6V1DQ9Y5K8 247 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 DNAH12Q6ZR08 3092 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 FOCADQ5VW36 1801 aa13.9□□□□□ -0.18
GGA3-217ENST00000583667 CCDC196A0A1B0GTZ2 297 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 CCDC69A6NI79 296 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 GOLGA8BA8MQT2 603 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 SMIM22K7EJ46 135 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 CDKL5O76039 1030 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 CALM1P0DP23 149 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 CALM2P0DP24 149 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 CALM3P0DP25 149 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 PLCD1P51178 756 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 RRP12Q5JTH9 1297 aaKnown RBP13.89□□□□□ -0.19
GGA3-217ENST00000583667 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
GGA3-217ENST00000583667 FAM83AQ86UY5 434 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 EHD4Q9H223 541 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
GGA3-217ENST00000583667 FAM217BQ9NTX9 383 aaPredicted RBP13.89□□□□□ -0.19
GGA3-217ENST00000583667 GJD2Q9UKL4 321 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 BAZ2AQ9UIF9 1905 aaKnown RBP13.89□□□□□ -0.19
GGA3-217ENST00000583667 TNKSO95271 1327 aa13.89□□□□□ -0.19
GGA3-217ENST00000583667 PTPDC1A2A3K4 754 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 RANBP6O60518 1105 aaKnown RBP13.88□□□□□ -0.19
GGA3-217ENST00000583667 ENTPD3O75355 529 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.19
GGA3-217ENST00000583667 CCT2P78371 535 aaKnown RBP13.88□□□□□ -0.19
GGA3-217ENST00000583667 GRIN2CQ14957 1233 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 NTRK3Q16288 839 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 FASTKD5Q7L8L6 764 aaKnown RBP13.88□□□□□ -0.19
GGA3-217ENST00000583667 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
GGA3-217ENST00000583667 ENAHQ8N8S7 591 aaPredicted RBP13.88□□□□□ -0.19
GGA3-217ENST00000583667 OSBPL5Q9H0X9 879 aaPredicted RBP13.88□□□□□ -0.19
GGA3-217ENST00000583667 TOMM22Q9NS69 142 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 SWAP70Q9UH65 585 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 STK36Q9NRP7 1315 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 NCOR1O75376 2440 aa13.88□□□□□ -0.19
GGA3-217ENST00000583667 GOLGA6L22H0YM25 854 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 JAK2O60674 1132 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 DDAH1O94760 285 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 F13A1P00488 732 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 FDPSP14324 419 aaKnown RBP13.87□□□□□ -0.19
GGA3-217ENST00000583667 IFNAR1P17181 557 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 RASA1P20936 1047 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 CDK8P49336 464 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 TROAPQ12815 778 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
GGA3-217ENST00000583667 MAP3K21Q5TCX8 1036 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 RCSD1Q6JBY9 416 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 ALYREFQ86V81 257 aaKnown RBP13.87□□□□□ -0.19
GGA3-217ENST00000583667 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
GGA3-217ENST00000583667 ANKRD13CQ8N6S4 541 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 NEDD1Q8NHV4 660 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
GGA3-217ENST00000583667 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 NCOA5Q9HCD5 579 aaKnown RBP13.87□□□□□ -0.19
GGA3-217ENST00000583667 SLC45A1Q9Y2W3 748 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 HCN4Q9Y3Q4 1203 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
GGA3-217ENST00000583667 DOCK3Q8IZD9 2030 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 A0A0G2JLL6 359 aaPredicted RBP13.86□□□□□ -0.19
GGA3-217ENST00000583667 TSPY2A6NKD2 308 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 CPLX1O14810 134 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 PRDM1O75626 825 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 TFAP4Q01664 338 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 EVX2Q03828 476 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 SKOR2Q2VWA4 1001 aaPredicted RBP13.86□□□□□ -0.19
GGA3-217ENST00000583667 IFIT1BQ5T764 474 aaKnown RBP13.86□□□□□ -0.19
GGA3-217ENST00000583667 LHX8Q68G74 356 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms