RNA–Protein interactions for RNA: ENST00000583559.1

PER1-215, Transcript of period circadian regulator 1, human

TSL 2

Gene PER1, Length 523 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PER1-215	ENST00000583559	APOA5	Q6Q788	366 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	SIAH1	Q8IUQ4	282 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	FANCB	Q8NB91	859 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	GMCL1	Q96IK5	515 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	C12orf42	Q96LP6	360 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.36	□□□□□ -0.59
PER1-215	ENST00000583559	EMILIN3	Q9NT22	766 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	AGTPBP1	Q9UPW5	1226 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	PHIP	Q8WWQ0	1821 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	BRCA2	P51587	3418 aa		11.36	□□□□□ -0.59
PER1-215	ENST00000583559	KLRF2	D3W0D1	207 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	ZBED4	O75132	1171 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	CDKL5	O76039	1030 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	FDX1	P10109	184 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	PDHB	P11177	359 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	VCAM1	P19320	739 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	ANP32A	P39687	249 aa	Known RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	CCT2	P78371	535 aa	Known RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	SP3	Q02447	781 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	TRAF1	Q13077	416 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	TOB2	Q14106	344 aa	Predicted RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	GRM4	Q14833	912 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	KCTD1	Q719H9	257 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	ANKRD23	Q86SG2	305 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	CCAR1	Q8IX12	1150 aa	Known RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	CCDC144CP	Q8IYA2	1237 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	PRPF38A	Q8NAV1	312 aa	Known RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	NKX2-3	Q8TAU0	364 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	ERO1A	Q96HE7	468 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	KIF2C	Q99661	725 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	LARP6	Q9BRS8	491 aa	Known RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	MYL10	Q9BUA6	226 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	AGXT2	Q9BYV1	514 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	ARHGAP39	Q9C0H5	1083 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	ZFYVE28	Q9HCC9	887 aa		11.35	□□□□□ -0.59
PER1-215	ENST00000583559	GPHN	Q9NQX3	736 aa	Predicted RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.35	□□□□□ -0.59
PER1-215	ENST00000583559	PDHX	O00330	501 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	RXRA	P19793	462 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	PDIA3	P30101	505 aa	Known RBP	11.34	□□□□□ -0.59
PER1-215	ENST00000583559	HOXA7	P31268	230 aa	Predicted RBP	11.34	□□□□□ -0.59
PER1-215	ENST00000583559	ZNF543	Q08ER8	600 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	CATSPERG	Q6ZRH7	1159 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	RAB11FIP4	Q86YS3	637 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	TRIM22	Q8IYM9	498 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	KIFC2	Q96AC6	838 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	PARK7	Q99497	189 aa	Known RBP	11.34	□□□□□ -0.59
PER1-215	ENST00000583559	NUP88	Q99567	741 aa	Predicted RBP	11.34	□□□□□ -0.59
PER1-215	ENST00000583559	SLF1	Q9BQI6	1058 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	CWC22	Q9HCG8	908 aa	Known RBP	11.34	□□□□□ -0.59
PER1-215	ENST00000583559	VAT1L	Q9HCJ6	419 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	ZCCHC17	Q9NP64	241 aa	Known RBP	11.34	□□□□□ -0.59
PER1-215	ENST00000583559	SEC63	Q9UGP8	760 aa	Known RBP	11.34	□□□□□ -0.59
PER1-215	ENST00000583559	PNMA2	Q9UL42	364 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	BRPF3	Q9ULD4	1205 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	PTPN22	Q9Y2R2	807 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	SLC45A1	Q9Y2W3	748 aa		11.34	□□□□□ -0.59
PER1-215	ENST00000583559	PTPRF	P10586	1907 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	TLR2	O60603	784 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	PLA2G6	O60733	806 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	GOLGA8H	P0CJ92	632 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	CTGF	P29279	349 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	SSRP1	Q08945	709 aa	Known RBP	11.33	□□□□□ -0.6
PER1-215	ENST00000583559	TROAP	Q12815	778 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	SYDE2	Q5VT97	1194 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	RRP36	Q96EU6	259 aa	Known RBP	11.33	□□□□□ -0.6
PER1-215	ENST00000583559	EFCC1	Q9HA90	598 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	SENP2	Q9HC62	589 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	RBM27	Q9P2N5	1060 aa	Known RBP	11.33	□□□□□ -0.6
PER1-215	ENST00000583559	KIF3A	Q9Y496	699 aa		11.33	□□□□□ -0.6
PER1-215	ENST00000583559	MKI67	P46013	3256 aa	Known RBP	11.33	□□□□□ -0.6
PER1-215	ENST00000583559	POTEF	A5A3E0	1075 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	PALM3	A6NDB9	673 aa	Predicted RBP	11.32	□□□□□ -0.6
PER1-215	ENST00000583559	PFKFB2	O60825	505 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	SNHG28	P0DPA3	235 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	SMARCA1	P28370	1054 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	DSG3	P32926	999 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	GCLC	P48506	637 aa	Predicted RBP	11.32	□□□□□ -0.6
PER1-215	ENST00000583559	SLC4A3	P48751	1232 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	EVC	P57679	992 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	PLS1	Q14651	629 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	TREML2	Q5T2D2	321 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	GPAT2	Q6NUI2	795 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	CCDC82	Q8N4S0	544 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	MB21D1	Q8N884	522 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	ARMC5	Q96C12	935 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	UBA5	Q9GZZ9	404 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.32	□□□□□ -0.6
PER1-215	ENST00000583559	CPA4	Q9UI42	421 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	MAD2L2	Q9UI95	211 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	TPCN1	Q9ULQ1	816 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.32	□□□□□ -0.6
PER1-215	ENST00000583559	PTCH2	Q9Y6C5	1203 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	MYPN	Q86TC9	1320 aa		11.32	□□□□□ -0.6
PER1-215	ENST00000583559	MYH6	P13533	1939 aa		11.31	□□□□□ -0.6
PER1-215	ENST00000583559	ECM2	O94769	699 aa	Predicted RBP	11.31	□□□□□ -0.6
PER1-215	ENST00000583559	XBP1	P17861	261 aa		11.31	□□□□□ -0.6
PER1-215	ENST00000583559	ADD1	P35611	737 aa	Known RBP	11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms