RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 FDX1P10109 184 aa25.31■■□□□ 1.64
TSEN54-208ENST00000583173 COL13A1Q5TAT6 717 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-208ENST00000583173 BLOC1S2Q6QNY1 142 aa25.31■■□□□ 1.64
TSEN54-208ENST00000583173 OTOP1Q7RTM1 612 aa25.31■■□□□ 1.64
TSEN54-208ENST00000583173 MAP3K14Q99558 947 aa25.31■■□□□ 1.64
TSEN54-208ENST00000583173 SPATC1LQ9H0A9 340 aa25.31■■□□□ 1.64
TSEN54-208ENST00000583173 MAD2L2Q9UI95 211 aa25.31■■□□□ 1.64
TSEN54-208ENST00000583173 GNRH1P01148 92 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 GOLGA8HP0CJ92 632 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 SLC16A2P36021 539 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 KIF22Q14807 665 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 GRM4Q14833 912 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 CCDC96Q2M329 555 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 ASPRV1Q53RT3 343 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 RUFY3Q7L099 469 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 CTU1Q7Z7A3 348 aaKnown RBP25.3■■□□□ 1.64
TSEN54-208ENST00000583173 STAG2Q8N3U4 1231 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 MOV10L1Q9BXT6 1211 aaKnown RBP25.3■■□□□ 1.64
TSEN54-208ENST00000583173 EFCC1Q9HA90 598 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 GJD2Q9UKL4 321 aa25.3■■□□□ 1.64
TSEN54-208ENST00000583173 CASTP20810 708 aaKnown RBP25.29■■□□□ 1.64
TSEN54-208ENST00000583173 SLC35G1Q2M3R5 365 aa25.29■■□□□ 1.64
TSEN54-208ENST00000583173 SYDE2Q5VT97 1194 aa25.29■■□□□ 1.64
TSEN54-208ENST00000583173 SAMD1Q6SPF0 538 aaPredicted RBP25.29■■□□□ 1.64
TSEN54-208ENST00000583173 CATIPQ7Z7H3 387 aa25.29■■□□□ 1.64
TSEN54-208ENST00000583173 ZNF654Q8IZM8 581 aa25.29■■□□□ 1.64
TSEN54-208ENST00000583173 BRPF3Q9ULD4 1205 aa25.29■■□□□ 1.64
TSEN54-208ENST00000583173 ZBED4O75132 1171 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 PARP1P09874 1014 aaKnown RBP25.28■■□□□ 1.64
TSEN54-208ENST00000583173 STAT3P40763 770 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 FCGRTP55899 365 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 Q6ZUG5 572 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 RIOX2Q8IUF8 465 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 SHCBP1Q8NEM2 672 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 UBA5Q9GZZ9 404 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 RANBP17Q9H2T7 1088 aaKnown RBP25.28■■□□□ 1.64
TSEN54-208ENST00000583173 ZNF536O15090 1300 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 A0A0G2JMZ2 1700 aa25.28■■□□□ 1.64
TSEN54-208ENST00000583173 DDAH1O94760 285 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 FMNL1O95466 1100 aaPredicted RBP25.27■■□□□ 1.64
TSEN54-208ENST00000583173 MAPK4P31152 587 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 OAZ1P54368 228 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 CCNA1P78396 465 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 ARHGEF6Q15052 776 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 CPVLQ9H3G5 476 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 RIPK3Q9Y572 518 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 TRIM17Q9Y577 477 aa25.27■■□□□ 1.64
TSEN54-208ENST00000583173 EVCP57679 992 aa25.26■■□□□ 1.63
TSEN54-208ENST00000583173 ALDH8A1Q9H2A2 487 aaPredicted RBP25.26■■□□□ 1.63
TSEN54-208ENST00000583173 SRRDQ9UH36 339 aa25.26■■□□□ 1.63
TSEN54-208ENST00000583173 CCDC69A6NI79 296 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 KLRF2D3W0D1 207 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 SNAP25P60880 206 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 MORN1Q5T089 497 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 NFXL1Q6ZNB6 911 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 GPR142Q7Z601 462 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 USP6NLQ92738 828 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 MTMR8Q96EF0 704 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 KIF2CQ99661 725 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 MYL10Q9BUA6 226 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 BACH2Q9BYV9 841 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 RAVER2Q9HCJ3 691 aaKnown RBP25.25■■□□□ 1.63
TSEN54-208ENST00000583173 GABRQQ9UN88 632 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 PTPN22Q9Y2R2 807 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 CYP46A1Q9Y6A2 500 aa25.25■■□□□ 1.63
TSEN54-208ENST00000583173 ECM2O94769 699 aaPredicted RBP25.24■■□□□ 1.63
TSEN54-208ENST00000583173 SLC25A27O95847 323 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 ERCC3P19447 782 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 IKQ13123 557 aaPredicted RBP25.24■■□□□ 1.63
TSEN54-208ENST00000583173 TOB2Q14106 344 aaPredicted RBP25.24■■□□□ 1.63
TSEN54-208ENST00000583173 PKN2Q16513 984 aaKnown RBP25.24■■□□□ 1.63
TSEN54-208ENST00000583173 APOA5Q6Q788 366 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 PLEKHH3Q7Z736 793 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 NBPF11Q86T75 865 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 ADGRF4Q8IZF3 695 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 TEX13BQ9BXU2 312 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 MROH8Q9H579 483 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 RIOX1Q9H6W3 641 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 JMJD4Q9H9V9 463 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 ISY1Q9ULR0 285 aaKnown RBP25.24■■□□□ 1.63
TSEN54-208ENST00000583173 SLC12A7Q9Y666 1083 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 DOCK3Q8IZD9 2030 aa25.24■■□□□ 1.63
TSEN54-208ENST00000583173 ZSWIM8A7E2V4 1837 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 TNPO2O14787 897 aaKnown RBP25.23■■□□□ 1.63
TSEN54-208ENST00000583173 PTPREP23469 700 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 HOXD10P28358 340 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 RBM25P49756 843 aaKnown RBP25.23■■□□□ 1.63
TSEN54-208ENST00000583173 PRMT2P55345 433 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 PLS1Q14651 629 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.23■■□□□ 1.63
TSEN54-208ENST00000583173 CPXCR1Q8N123 301 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 FANCBQ8NB91 859 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 AGBL1Q96MI9 1066 aa25.23■■□□□ 1.63
TSEN54-208ENST00000583173 UPF3BQ9BZI7 483 aaKnown RBP25.23■■□□□ 1.63
TSEN54-208ENST00000583173 CYTH3O43739 400 aa25.22■■□□□ 1.63
TSEN54-208ENST00000583173 CALM1P0DP23 149 aa25.22■■□□□ 1.63
TSEN54-208ENST00000583173 CALM2P0DP24 149 aa25.22■■□□□ 1.63
TSEN54-208ENST00000583173 CALM3P0DP25 149 aa25.22■■□□□ 1.63
TSEN54-208ENST00000583173 SMARCA1P28370 1054 aa25.22■■□□□ 1.63
TSEN54-208ENST00000583173 SNRNP48Q6IEG0 339 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms