RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ACLYP53396 1101 aa19.4■□□□□ 0.7
SREBF1-221ENST00000583080 IRX5P78411 483 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-221ENST00000583080 FAAP100Q0VG06 881 aa19.4■□□□□ 0.7
SREBF1-221ENST00000583080 SNRNP48Q6IEG0 339 aaKnown RBP19.4■□□□□ 0.7
SREBF1-221ENST00000583080 STK11IPQ8N1F8 1099 aa19.4■□□□□ 0.7
SREBF1-221ENST00000583080 DDRGK1Q96HY6 314 aa19.4■□□□□ 0.7
SREBF1-221ENST00000583080 STARD7Q9NQZ5 370 aa19.4■□□□□ 0.7
SREBF1-221ENST00000583080 ARPP21Q9UBL0 812 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-221ENST00000583080 ZHX1Q9UKY1 873 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-221ENST00000583080 ADCY6O43306 1168 aa19.39■□□□□ 0.69
SREBF1-221ENST00000583080 RASA1P20936 1047 aa19.39■□□□□ 0.69
SREBF1-221ENST00000583080 ANKRD33Q7Z3H0 272 aa19.39■□□□□ 0.69
SREBF1-221ENST00000583080 KLHDC9Q8NEP7 349 aa19.39■□□□□ 0.69
SREBF1-221ENST00000583080 TEX13BQ9BXU2 312 aa19.39■□□□□ 0.69
SREBF1-221ENST00000583080 TTC28Q96AY4 2481 aa19.39■□□□□ 0.69
SREBF1-221ENST00000583080 DNAJC25-GNG10A0A024R161 153 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 TMEM265A0A087WTH1 108 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 MCM3APO60318 1980 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 NDUFB10O96000 172 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 CCSAPQ6IQ19 270 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-221ENST00000583080 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 TOX2Q96NM4 488 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 SYNGAP1Q96PV0 1343 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 TSEN34Q9BSV6 310 aaKnown RBP19.38■□□□□ 0.69
SREBF1-221ENST00000583080 DDX19BQ9UMR2 479 aa19.38■□□□□ 0.69
SREBF1-221ENST00000583080 SMARCA5O60264 1052 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-221ENST00000583080 DNAJB2P25686 324 aa19.37■□□□□ 0.69
SREBF1-221ENST00000583080 SLC4A3P48751 1232 aa19.37■□□□□ 0.69
SREBF1-221ENST00000583080 KCNA10Q16322 511 aa19.37■□□□□ 0.69
SREBF1-221ENST00000583080 MSL3Q8N5Y2 521 aaKnown RBP19.37■□□□□ 0.69
SREBF1-221ENST00000583080 FGD4Q96M96 766 aa19.37■□□□□ 0.69
SREBF1-221ENST00000583080 TBX21Q9UL17 535 aa19.37■□□□□ 0.69
SREBF1-221ENST00000583080 FAM184BQ9ULE4 1060 aa19.37■□□□□ 0.69
SREBF1-221ENST00000583080 MYH4Q9Y623 1939 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 MOXD2PA6NHM9 499 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 DCDC2CA8MYV0 355 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 F5H6K3 240 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 KLRC3Q07444 240 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 MAMDC4Q6UXC1 1216 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 CPXCR1Q8N123 301 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 NUP133Q8WUM0 1156 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 DDX11Q96FC9 970 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 STRBPQ96SI9 672 aaKnown RBP19.36■□□□□ 0.69
SREBF1-221ENST00000583080 NYAP2Q9P242 653 aa19.36■□□□□ 0.69
SREBF1-221ENST00000583080 GSG1L2A8MUP6 293 aa19.35■□□□□ 0.69
SREBF1-221ENST00000583080 MS4A1P11836 297 aa19.35■□□□□ 0.69
SREBF1-221ENST00000583080 SBK1Q52WX2 424 aa19.35■□□□□ 0.69
SREBF1-221ENST00000583080 ZSCAN25Q6NSZ9 544 aa19.35■□□□□ 0.69
SREBF1-221ENST00000583080 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.35■□□□□ 0.697e-10■■□□□ 11.5
SREBF1-221ENST00000583080 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
SREBF1-221ENST00000583080 EPB41L4AQ9HCS5 686 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-221ENST00000583080 IGKV6D-41A0A0C4DH26 115 aa19.34■□□□□ 0.69
SREBF1-221ENST00000583080 MINDY4BA8MYZ0 360 aa19.34■□□□□ 0.69
SREBF1-221ENST00000583080 DUSP11O75319 330 aaKnown RBP19.34■□□□□ 0.69
SREBF1-221ENST00000583080 TIMP1P01033 207 aa19.34■□□□□ 0.69
SREBF1-221ENST00000583080 C6orf222P0C671 652 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-221ENST00000583080 CST5P28325 142 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-221ENST00000583080 MIER1Q8N108 512 aa19.34■□□□□ 0.69
SREBF1-221ENST00000583080 KIFC2Q96AC6 838 aa19.34■□□□□ 0.69
SREBF1-221ENST00000583080 MKNK2Q9HBH9 465 aa19.34■□□□□ 0.69
SREBF1-221ENST00000583080 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-221ENST00000583080 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-221ENST00000583080 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-221ENST00000583080 ATP2A1O14983 1001 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 PRDM1O75626 825 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 ACVR2BQ13705 512 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 CCDC144BQ3MJ40 725 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.33■□□□□ 0.68
SREBF1-221ENST00000583080 C16orf59Q7L2K0 433 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 ZNF467Q7Z7K2 595 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-221ENST00000583080 PRPF38AQ8NAV1 312 aaKnown RBP19.33■□□□□ 0.68
SREBF1-221ENST00000583080 OSBP2Q969R2 916 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 TIFAQ96CG3 184 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 GLT1D1Q96MS3 346 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 LRRCC1Q9C099 1032 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 ZNF576Q9H609 170 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 SLC38A10Q9HBR0 1119 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.68
SREBF1-221ENST00000583080 ASGR1P07306 291 aa19.32■□□□□ 0.68
SREBF1-221ENST00000583080 PBX2P40425 430 aa19.32■□□□□ 0.68
SREBF1-221ENST00000583080 CDK7P50613 346 aa19.32■□□□□ 0.68
SREBF1-221ENST00000583080 TSHZ3Q63HK5 1081 aa19.32■□□□□ 0.68
SREBF1-221ENST00000583080 MFSD5Q6N075 450 aa19.32■□□□□ 0.68
SREBF1-221ENST00000583080 ARMCX2Q7L311 632 aa19.32■□□□□ 0.68
SREBF1-221ENST00000583080 LRRC47Q8N1G4 583 aaKnown RBP19.32■□□□□ 0.68
SREBF1-221ENST00000583080 UPF3AQ9H1J1 476 aaKnown RBP19.32■□□□□ 0.68
SREBF1-221ENST00000583080 LRRC37A2A6NM11 1700 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 ELP1O95163 1332 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 MROH7Q68CQ1 1323 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 GRXCR1A8MXD5 290 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 CTAGE5O15320 804 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 ZBED4O75132 1171 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 CSF2RAP15509 400 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 TMEM240Q5SV17 173 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 GIMAP6Q6P9H5 292 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 ANKRD35Q8N283 1001 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 CEP95Q96GE4 821 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 PPP1R12CQ9BZL4 782 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 KATNBL1Q9H079 304 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms