RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	PI4K2B	Q8TCG2	481 aa		13.87	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TEX13B	Q9BXU2	312 aa		13.87	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	RAVER2	Q9HCJ3	691 aa	Known RBP	13.87	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	LTBP2	Q14767	1821 aa		13.87	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	ERC2	O15083	957 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	ZBED4	O75132	1171 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	COPB2	P35606	906 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	PRPF38A	Q8NAV1	312 aa	Known RBP	13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	BAD	Q92934	168 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	DDX11	Q96FC9	970 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	FAM161B	Q96MY7	647 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	NAPB	Q9H115	298 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	MTMR10	Q9NXD2	777 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	MTMR4	Q9NYA4	1195 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TTC41P	Q6P2S7	1318 aa		13.86	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TRIM43B	A6NCK2	446 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TTLL1	O95922	423 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TSPY3	P0CV98	308 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TSPY8	P0CW00	308 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	MX1	P20591	662 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	GPR153	Q6NV75	609 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	NACAP1	Q9BZK3	213 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	ZNF287	Q9HBT7	754 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	INCENP	Q9NQS7	918 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	PDLIM7	Q9NR12	457 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	HOMER2	Q9NSB8	354 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	CNPY2	Q9Y2B0	182 aa		13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	DIS3	Q9Y2L1	958 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114		A0A1W2PQ45	241 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114		A0A1W2PQY0	241 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	AKR1A1	P14550	325 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	IRX5	P78411	483 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TFAP4	Q01664	338 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TLE2	Q04725	743 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	PDE4B	Q07343	736 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	PPARA	Q07869	468 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	SNX17	Q15036	470 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	SHH	Q15465	462 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	ZMYM1	Q5SVZ6	1142 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	C9orf50	Q5SZB4	431 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	SLFN13	Q68D06	897 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	RNF180	Q86T96	592 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	NRBP1	Q9UHY1	535 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	FEM1B	Q9UK73	627 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	PHF24	Q9UPV7	400 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	MTMR7	Q9Y216	660 aa		13.84	□□□□□ -0.19
CDK5RAP3-223	ENST00000582114	TMEM232	C9JQI7	657 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	PQBP1	O60828	265 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SNAI1	O95863	264 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	BMP3	P12645	472 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	RRP1	P56182	461 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SNAP25	P60880	206 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CTDSPL2	Q05D32	466 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	IK	Q13123	557 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ANKRD45	Q5TZF3	282 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	RASGRP2	Q7LDG7	609 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ANKRD35	Q8N283	1001 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	GMCL1P1	Q8NEA9	526 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	NEDD1	Q8NHV4	660 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	MKL1	Q969V6	931 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CRBN	Q96SW2	442 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SLC38A10	Q9HBR0	1119 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SYNRG	Q9UMZ2	1314 aa		13.83	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	DNAJC25-GNG10	A0A024R161	153 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	MYADML2	A6NDP7	307 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	NMT2	O60551	498 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SLC3A2	P08195	630 aa	Known RBP	13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ITGB8	P26012	769 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	FAM184B	Q9ULE4	1060 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	STX8	Q9UNK0	236 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	STXBP5L	Q9Y2K9	1186 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SYNGAP1	Q96PV0	1343 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	PLIN4	Q96Q06	1357 aa		13.82	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	TSPY2	A6NKD2	308 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	DLL1	O00548	723 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ATP2A1	O14983	1001 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	FOXP2	O15409	715 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ADCY6	O43306	1168 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ADAMTS4	O75173	837 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CLTB	P09497	229 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	MCC	P23508	829 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SLC1A4	P43007	532 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	STAT2	P52630	851 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CNTN2	Q02246	1040 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ACVR2B	Q13705	512 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	KCNA10	Q16322	511 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	VPS53	Q5VIR6	699 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	KCTD1	Q719H9	257 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	FGD4	Q96M96	766 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	AGBL1	Q96MI9	1066 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	TACC3	Q9Y6A5	838 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	MCM3AP	O60318	1980 aa		13.81	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	POTEB2	H3BUK9	544 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ACLY	P53396	1101 aa		13.8	□□□□□ -0.2

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