RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 NPLOC4Q8TAT6 608 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 U2AF1L4Q8WU68 220 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 TMEM47Q9BQJ4 181 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.11□□□□□ -0.471e-10■■□□□ 13.3
PPP4R1-220ENST00000581835 SLC38A10Q9HBR0 1119 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 FLRT1Q9NZU1 646 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 ATP2A1O14983 1001 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 PLA2G6O60733 806 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 ZBED4O75132 1171 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 STAT2P52630 851 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 CACNB2Q08289 660 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 RASGRP2Q7LDG7 609 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 FAM160B2Q86V87 743 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 TTC14Q96N46 770 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 DEFB118Q96PH6 123 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
PPP4R1-220ENST00000581835 B4E1Z4 1266 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 COBLO75128 1261 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 KDM4AO75164 1064 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 IGHA2P01877 340 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 FDX1P10109 184 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 FCER1AP12319 257 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 COPB2P35606 906 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 SNRNP48Q6IEG0 339 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 CPXCR1Q8N123 301 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 DCAF4Q8WV16 495 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 ZKSCAN3Q9BRR0 538 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 RAVER2Q9HCJ3 691 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 ZSWIM5Q9P217 1185 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 ISY1Q9ULR0 285 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 RIPK3Q9Y572 518 aa12.09□□□□□ -0.47
PPP4R1-220ENST00000581835 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 CYP21A2P08686 494 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 CAPN2P17655 700 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 OAZ1P54368 228 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 BMP2KLQ5H9B9 411 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 MFSD14CQ5VZR4 134 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 OLFML2BQ68BL8 750 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 UBE2Q1Q7Z7E8 422 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 IQCA1Q86XH1 822 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 DGKHQ86XP1 1220 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 MAP4K1Q92918 833 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 MMP19Q99542 508 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 KRT23Q9C075 422 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 CNNM2Q9H8M5 875 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 SLC5A4Q9NY91 659 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-220ENST00000581835 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 MCM3APO60318 1980 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 NEFLP07196 543 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 PGK2P07205 417 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 SNHG28P0DPA3 235 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 PDHBP11177 359 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 CYP2C19P33261 490 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 SLC4A3P48751 1232 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 KCTD2Q14681 263 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 ANKS1AQ92625 1134 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 MAML3Q96JK9 1138 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 ZSCAN10Q96SZ4 725 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 ZNF536O15090 1300 aa12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-220ENST00000581835 SLC16A2P36021 539 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 SNAP25P60880 206 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 ZNF543Q08ER8 600 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 LHX8Q68G74 356 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 BTNL9Q6UXG8 535 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 CHST13Q8NET6 341 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 OGDHLQ9ULD0 1010 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 DIS3Q9Y2L1 958 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 TNKSO95271 1327 aa12.06□□□□□ -0.48
PPP4R1-220ENST00000581835 MYH6P13533 1939 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 E7EWF7 191 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 FARP2O94887 1054 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 CYBAP13498 195 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 TRDNQ13061 729 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 ZNF792Q3KQV3 632 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 SYDE2Q5VT97 1194 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 KIAA1211Q6ZU35 1233 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 CYB5R4Q7L1T6 521 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms