RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 BAZ2BQ9UIF8 2168 aaKnown RBP16.78■□□□□ 0.28
MKS1-211ENST00000581761 ASTN2O75129 1339 aaPredicted RBP16.77■□□□□ 0.28
MKS1-211ENST00000581761 STXBP3O00186 592 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 GDF11O95390 407 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.28
MKS1-211ENST00000581761 CCDC192P0DO97 292 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 SNHG28P0DPA3 235 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 CMA1P23946 247 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
MKS1-211ENST00000581761 CCDC96Q2M329 555 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 ABCB5Q2M3G0 1257 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 EARS2Q5JPH6 523 aaKnown RBP16.77■□□□□ 0.28
MKS1-211ENST00000581761 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.28
MKS1-211ENST00000581761 FAM151AQ8WW52 585 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 ANP32BQ92688 251 aaKnown RBP16.77■□□□□ 0.28
MKS1-211ENST00000581761 KLRG1Q96E93 195 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 VAT1LQ9HCJ6 419 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 GPCPD1Q9NPB8 672 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 SEC63Q9UGP8 760 aaKnown RBP16.77■□□□□ 0.28
MKS1-211ENST00000581761 PCDHA4Q9UN74 947 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 PCDHB6Q9Y5E3 794 aa16.77■□□□□ 0.28
MKS1-211ENST00000581761 TRIM75PA6NK02 468 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 NDUFA8P51970 172 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 KIF4BQ2VIQ3 1234 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 TMEM179Q6ZVK1 233 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 BLIDQ8IZY5 108 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 FMR1NBQ8N0W7 255 aaPredicted RBP16.76■□□□□ 0.27
MKS1-211ENST00000581761 FAM177A1Q8N128 213 aaPredicted RBP16.76■□□□□ 0.27
MKS1-211ENST00000581761 KRI1Q8N9T8 703 aaKnown RBP16.76■□□□□ 0.27
MKS1-211ENST00000581761 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 KANSL2Q9H9L4 492 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 MYOZ2Q9NPC6 264 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.76■□□□□ 0.27
MKS1-211ENST00000581761 BARHL2Q9NY43 387 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 NYAP2Q9P242 653 aa16.76■□□□□ 0.27
MKS1-211ENST00000581761 MYO1BO43795 1136 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
MKS1-211ENST00000581761 PFKFB1P16118 471 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 NAPAP54920 295 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 ICA1Q05084 483 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 TYRO3Q06418 890 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 FMR1Q06787 632 aaKnown RBP eCLIP16.75■□□□□ 0.27
MKS1-211ENST00000581761 SEPT2Q15019 361 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
MKS1-211ENST00000581761 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
MKS1-211ENST00000581761 TTC38Q5R3I4 469 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 FKBP1CQ5VVH2 108 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 GALNT17Q6IS24 598 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 SASS6Q6UVJ0 657 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 PIK3AP1Q6ZUJ8 805 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 DAGLBQ8NCG7 672 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 CCDC12Q8WUD4 166 aaPredicted RBP16.75■□□□□ 0.27
MKS1-211ENST00000581761 ZBED3Q96IU2 234 aaPredicted RBP16.75■□□□□ 0.27
MKS1-211ENST00000581761 CLIC6Q96NY7 704 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 PIGSQ96S52 555 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 RIOX1Q9H6W3 641 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.27
MKS1-211ENST00000581761 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
MKS1-211ENST00000581761 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
MKS1-211ENST00000581761 BMP15O95972 392 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 PTPREP23469 700 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 NBPF9Q3BBW0 867 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 RESP18Q5W5W9 173 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 TYW1BQ6NUM6 668 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 SHC4Q6S5L8 630 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 DCAF4Q8WV16 495 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 MKL1Q969V6 931 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
MKS1-211ENST00000581761 MYH4Q9Y623 1939 aa16.74■□□□□ 0.27
MKS1-211ENST00000581761 PASKQ96RG2 1323 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 WNT10BO00744 389 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 TRAPPC10P48553 1259 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 MMP14P50281 582 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 UVSSAQ2YD98 709 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 GPATCH4Q5T3I0 446 aaKnown RBP16.73■□□□□ 0.27
MKS1-211ENST00000581761 SLFN13Q68D06 897 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 ZNF713Q8N859 430 aaPredicted RBP16.73■□□□□ 0.27
MKS1-211ENST00000581761 ZC3H15Q8WU90 426 aaKnown RBP16.73■□□□□ 0.27
MKS1-211ENST00000581761 CREBZFQ9NS37 354 aa16.73■□□□□ 0.27
MKS1-211ENST00000581761 MORC2Q9Y6X9 1032 aaPredicted RBP16.73■□□□□ 0.27
MKS1-211ENST00000581761 FAM237AA0A1B0GTK4 181 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 CCDC194A0A1B0GVG4 234 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 TRAF5O00463 557 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 ADAMTS3O15072 1205 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 RAD21O60216 631 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 ZNF202O95125 648 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 GH2P01242 217 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 SYKP43405 635 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 CCDC173Q0VFZ6 552 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 ZNF174Q15697 407 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 FAM83AQ86UY5 434 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 RASGRP4Q8TDF6 673 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 SDF4Q9BRK5 362 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 GLIS2Q9BZE0 524 aaPredicted RBP16.72■□□□□ 0.27
MKS1-211ENST00000581761 C6orf50Q9HD87 102 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms