RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TFRCP02786 760 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 HOXA7P31268 230 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 IRX3P78415 501 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 KLRC3Q07444 240 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 IFIT1BQ5T764 474 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 CYB5R4Q7L1T6 521 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 ENAHQ8N8S7 591 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 ANKS1AQ92625 1134 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 TMEM87BQ96K49 555 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 ZKSCAN3Q9BRR0 538 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 KAT14Q9H8E8 782 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 PAK6Q9NQU5 681 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
CSNK1D-220ENST00000581737 NDUFB10O96000 172 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 TMEM67Q5HYA8 995 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 TREML2Q5T2D2 321 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 RCSD1Q6JBY9 416 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 BLOC1S2Q6QNY1 142 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 DHX32Q7L7V1 743 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 GTF3C2Q8WUA4 911 aaPredicted RBP15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 GMCL1Q96IK5 515 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 JAKMIP1Q96N16 626 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 TMEM47Q9BQJ4 181 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 CRISPLD2Q9H0B8 497 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 EYSQ5T1H1 3165 aa15.75■□□□□ 0.11
CSNK1D-220ENST00000581737 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 WTAPQ15007 396 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 SLFN13Q68D06 897 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 Q7L0L9 218 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 SPICE1Q8N0Z3 855 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 TMTC2Q8N394 836 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 SMCR8Q8TEV9 937 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 DCAF4Q8WV16 495 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 TANGO6Q9C0B7 1094 aa15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 SPTBN5Q9NRC6 3674 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 LAMA2P24043 3122 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-220ENST00000581737 TNPO2O14787 897 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 NEK4P51957 841 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 ANTXR2P58335 489 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 TRIM32Q13049 653 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 SEC23AQ15436 765 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 ADCK5Q3MIX3 580 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 PNMA1Q8ND90 353 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 PXYLP1Q8TE99 480 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 GDF15Q99988 308 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 TM6SF1Q9BZW5 370 aa15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 ASCC2Q9H1I8 757 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 ISY1Q9ULR0 285 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 ZMYND8Q9ULU4 1186 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-220ENST00000581737 BMP3P12645 472 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 CASTP20810 708 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 SLC1A4P43007 532 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 GCLCP48506 637 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 FGD1P98174 961 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 IRF5Q13568 498 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 FAM83BQ5T0W9 1011 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 CATSPERGQ6ZRH7 1159 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 CHST3Q7LGC8 479 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 ANKRD13CQ8N6S4 541 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 SLKQ9H2G2 1235 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 CWC22Q9HCG8 908 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 CYP46A1Q9Y6A2 500 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 PARP14Q460N5 1801 aa15.72■□□□□ 0.11
CSNK1D-220ENST00000581737 SH2B2O14492 632 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 FLOT1O75955 427 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 LIFRP42702 1097 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 COG2Q14746 738 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 CCDC96Q2M329 555 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 KIAA1755Q5JYT7 1200 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 C7orf61Q8IZ16 206 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 IGDCC4Q8TDY8 1250 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 HOXC10Q9NYD6 342 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 FEM1BQ9UK73 627 aa15.71■□□□□ 0.11
CSNK1D-220ENST00000581737 MGAMO43451 1857 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 CCDC69A6NI79 296 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 PDHBP11177 359 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 SYN1P17600 705 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 RPS6KB1P23443 525 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 HERVK_113P62684 666 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 EXOSC10Q01780 885 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 GPATCH4Q5T3I0 446 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 NFXL1Q6ZNB6 911 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 FAM160B2Q86V87 743 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 CHURC1Q8WUH1 139 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 NUP88Q99567 741 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.13e-9■■■□□ 16.2
CSNK1D-220ENST00000581737 LY9Q9HBG7 655 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 MTMR7Q9Y216 660 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 ALPK3Q96L96 1907 aa15.7■□□□□ 0.1
CSNK1D-220ENST00000581737 A0A0G2JMZ2 1700 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 RLFQ13129 1914 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 PEX10O60683 326 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms