RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 PDE4AP27815 886 aa20.08■□□□□ 0.81
CDC42EP4-206ENST00000581014 OAZ1P54368 228 aa20.08■□□□□ 0.81
CDC42EP4-206ENST00000581014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.08■□□□□ 0.81
CDC42EP4-206ENST00000581014 NBPF3Q9H094 633 aa20.08■□□□□ 0.81
CDC42EP4-206ENST00000581014 COL11A1P12107 1806 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 RANBP6O60518 1105 aaKnown RBP20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 ZBED4O75132 1171 aa20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 CYBAP13498 195 aa20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 CYP2C19P33261 490 aa20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 DIAPH3Q9NSV4 1193 aa20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 STX8Q9UNK0 236 aa20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 COLQQ9Y215 455 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP4-206ENST00000581014 TRIOBPQ9H2D6 2365 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 KCTD2Q14681 263 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 AKNAD1Q5T1N1 836 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 FAM160B2Q86V87 743 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 DIS3LQ8TF46 1054 aaKnown RBP20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 CHURC1Q8WUH1 139 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 STAG1Q8WVM7 1258 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 MAML3Q96JK9 1138 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 MMP19Q99542 508 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 NRBP1Q9UHY1 535 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 NR2E3Q9Y5X4 410 aa20.06■□□□□ 0.8
CDC42EP4-206ENST00000581014 NMT2O60551 498 aa20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 COL6A1P12109 1028 aa20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 SLC1A4P43007 532 aa20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 SNRNP48Q6IEG0 339 aaKnown RBP20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 TRPV1Q8NER1 839 aa20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 KIFC2Q96AC6 838 aa20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 DSCC1Q9BVC3 393 aa20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 RNF41Q9H4P4 317 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 DDX20Q9UHI6 824 aaKnown RBP20.05■□□□□ 0.8
CDC42EP4-206ENST00000581014 TMEM232C9JQI7 657 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 STAT2P52630 851 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 IRX6P78412 446 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 TTC22Q5TAA0 569 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 RCSD1Q6JBY9 416 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 MFSD6Q6ZSS7 791 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 TTC14Q96N46 770 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 C11orf49Q9H6J7 331 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 RIPK3Q9Y572 518 aa20.04■□□□□ 0.8
CDC42EP4-206ENST00000581014 TOP1P11387 765 aaKnown RBP20.03■□□□□ 0.8
CDC42EP4-206ENST00000581014 GSPT1P15170 499 aaKnown RBP20.03■□□□□ 0.8
CDC42EP4-206ENST00000581014 MCCP23508 829 aa20.03■□□□□ 0.8
CDC42EP4-206ENST00000581014 CHRDL2Q6WN34 429 aa20.03■□□□□ 0.8
CDC42EP4-206ENST00000581014 MSL3Q8N5Y2 521 aaKnown RBP20.03■□□□□ 0.8
CDC42EP4-206ENST00000581014 CHST13Q8NET6 341 aa20.03■□□□□ 0.8
CDC42EP4-206ENST00000581014 FBXO40Q9UH90 709 aa20.03■□□□□ 0.8
CDC42EP4-206ENST00000581014 MYH4Q9Y623 1939 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 RANBP2P49792 3224 aaKnown RBP20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 DNAJC25-GNG10A0A024R161 153 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 ZNF213O14771 459 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 SEPT4O43236 478 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 EVI5O60447 810 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 HAND2P61296 217 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 TBC1D10CQ8IV04 446 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 DCAF4Q8WV16 495 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 TINF2Q9BSI4 451 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 TOMM22Q9NS69 142 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 PCDH10Q9P2E7 1040 aa20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 CTDP1Q9Y5B0 961 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP4-206ENST00000581014 ZNFX1Q9P2E3 1918 aaKnown RBP20.02■□□□□ 0.79
CDC42EP4-206ENST00000581014 PGK2P07205 417 aa20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 FXR1P51114 621 aaKnown RBP eCLIP20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 CPXCR1Q8N123 301 aa20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 ESR2Q92731 530 aa20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 TMEM47Q9BQJ4 181 aa20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 RAVER2Q9HCJ3 691 aaKnown RBP20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 CTNNA3Q9UI47 895 aa20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 PFASO15067 1338 aa20.01■□□□□ 0.79
CDC42EP4-206ENST00000581014 RRP12Q5JTH9 1297 aaKnown RBP20■□□□□ 0.79
CDC42EP4-206ENST00000581014 MAMDC4Q6UXC1 1216 aa20■□□□□ 0.79
CDC42EP4-206ENST00000581014 BTNL9Q6UXG8 535 aa20■□□□□ 0.79
CDC42EP4-206ENST00000581014 ZNF467Q7Z7K2 595 aaPredicted RBP20■□□□□ 0.79
CDC42EP4-206ENST00000581014 ZNF536O15090 1300 aa20■□□□□ 0.79
CDC42EP4-206ENST00000581014 RAD50Q92878 1312 aa20■□□□□ 0.79
CDC42EP4-206ENST00000581014 PLXNA1Q9UIW2 1896 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 DNM1LO00429 736 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 CNGA1P29973 690 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 TKFCQ3LXA3 575 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 KCTD1Q719H9 257 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 DGKHQ86XP1 1220 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 DDX11Q96FC9 970 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 PRR12Q9ULL5 1215 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 SYNGAP1Q96PV0 1343 aa19.99■□□□□ 0.79
CDC42EP4-206ENST00000581014 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 IMMTQ16891 758 aaKnown RBP19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 CCDC178Q5BJE1 867 aa19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 ARRDC4Q8NCT1 418 aa19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 ANKS1AQ92625 1134 aa19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 IL25Q9H293 177 aa19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 PRO3102Q9H379 93 aa19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 NEDD4P46934 1319 aa19.98■□□□□ 0.79
CDC42EP4-206ENST00000581014 PRAMEF19Q5SWL8 479 aa19.97■□□□□ 0.79
CDC42EP4-206ENST00000581014 RBM27Q9P2N5 1060 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-206ENST00000581014 ZNF865P0CJ78 1059 aaPredicted RBP19.96■□□□□ 0.79
CDC42EP4-206ENST00000581014 PDHBP11177 359 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms