RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 USP17L21D6R901 530 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 CSF2RAP15509 400 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 RASIP1Q5U651 963 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 CCDC129Q6ZRS4 1044 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 C16orf86Q6ZW13 317 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 GAS2L1Q99501 681 aaPredicted RBP23.05■■□□□ 1.28
NDEL1-209ENST00000580738 KANSL2Q9H9L4 492 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 ZHX1Q9UKY1 873 aaPredicted RBP23.05■■□□□ 1.28
NDEL1-209ENST00000580738 RIPK3Q9Y572 518 aa23.05■■□□□ 1.28
NDEL1-209ENST00000580738 CHGBP05060 677 aa23.04■■□□□ 1.28
NDEL1-209ENST00000580738 ACRP10323 421 aa23.04■■□□□ 1.28
NDEL1-209ENST00000580738 COPB2P35606 906 aa23.04■■□□□ 1.28
NDEL1-209ENST00000580738 CDK7P50613 346 aa23.04■■□□□ 1.28
NDEL1-209ENST00000580738 PPIGQ13427 754 aaKnown RBP eCLIP23.04■■□□□ 1.283e-7■□□□□ 10.3
NDEL1-209ENST00000580738 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.04■■□□□ 1.28
NDEL1-209ENST00000580738 NUP88Q99567 741 aaPredicted RBP23.04■■□□□ 1.28
NDEL1-209ENST00000580738 BCL11AQ9H165 835 aa23.04■■□□□ 1.28
NDEL1-209ENST00000580738 GOPCQ9HD26 462 aa23.04■■□□□ 1.28
NDEL1-209ENST00000580738 SYNGAP1Q96PV0 1343 aa23.04■■□□□ 1.28
NDEL1-209ENST00000580738 APBB1O00213 710 aa23.03■■□□□ 1.28
NDEL1-209ENST00000580738 ADCY6O43306 1168 aa23.03■■□□□ 1.28
NDEL1-209ENST00000580738 SNRNP48Q6IEG0 339 aaKnown RBP23.03■■□□□ 1.28
NDEL1-209ENST00000580738 MAMDC4Q6UXC1 1216 aa23.03■■□□□ 1.28
NDEL1-209ENST00000580738 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
NDEL1-209ENST00000580738 ATXN2LQ8WWM7 1075 aaKnown RBP23.03■■□□□ 1.28
NDEL1-209ENST00000580738 DDX11Q96FC9 970 aa23.03■■□□□ 1.28
NDEL1-209ENST00000580738 GLT1D1Q96MS3 346 aa23.03■■□□□ 1.28
NDEL1-209ENST00000580738 ELP1O95163 1332 aa23.03■■□□□ 1.28
NDEL1-209ENST00000580738 DNAJC25-GNG10A0A024R161 153 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 DUSP11O75319 330 aaKnown RBP23.02■■□□□ 1.28
NDEL1-209ENST00000580738 ASGR1P07306 291 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 C6orf222P0C671 652 aaPredicted RBP23.02■■□□□ 1.28
NDEL1-209ENST00000580738 ADD2P35612 726 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 ADGRE1Q14246 886 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 CCDC85BQ15834 202 aaPredicted RBP23.02■■□□□ 1.28
NDEL1-209ENST00000580738 AKNAD1Q5T1N1 836 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 ZNF365Q70YC5 407 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 VTI1AQ96AJ9 217 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 ASB2Q96Q27 587 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.02■■□□□ 1.28
NDEL1-209ENST00000580738 TEX13BQ9BXU2 312 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 PPP1R12CQ9BZL4 782 aa23.02■■□□□ 1.28
NDEL1-209ENST00000580738 CST5P28325 142 aaPredicted RBP23.01■■□□□ 1.27
NDEL1-209ENST00000580738 SLC4A3P48751 1232 aa23.01■■□□□ 1.27
NDEL1-209ENST00000580738 CLASRPQ8N2M8 674 aaKnown RBP23.01■■□□□ 1.27
NDEL1-209ENST00000580738 SLF1Q9BQI6 1058 aa23.01■■□□□ 1.27
NDEL1-209ENST00000580738 MYH8P13535 1937 aa23.01■■□□□ 1.27
NDEL1-209ENST00000580738 BAZ2AQ9UIF9 1905 aaKnown RBP23.01■■□□□ 1.27
NDEL1-209ENST00000580738 BDP1A6H8Y1 2624 aa23.01■■□□□ 1.27
NDEL1-209ENST00000580738 MROH7Q68CQ1 1323 aa23.01■■□□□ 1.27
NDEL1-209ENST00000580738 ACVR2BQ13705 512 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 HSP90AB4PQ58FF6 505 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 CTR9Q6PD62 1173 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 CCDC174Q6PII3 467 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 AMOTL1Q8IY63 956 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 TMEM199Q8N511 208 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 ADAMTS19Q8TE59 1207 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 PAG1Q9NWQ8 432 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 THEGQ9P2T0 379 aa23■■□□□ 1.27
NDEL1-209ENST00000580738 ARVCFO00192 962 aa22.99■■□□□ 1.27
NDEL1-209ENST00000580738 IFIT2P09913 472 aaKnown RBP22.99■■□□□ 1.27
NDEL1-209ENST00000580738 CCDC144BQ3MJ40 725 aa22.99■■□□□ 1.27
NDEL1-209ENST00000580738 FAM126BQ8IXS8 530 aa22.99■■□□□ 1.27
NDEL1-209ENST00000580738 PCSK9Q8NBP7 692 aaKnown RBP22.99■■□□□ 1.27
NDEL1-209ENST00000580738 BOLA2Q9H3K6 86 aa22.99■■□□□ 1.27
NDEL1-209ENST00000580738 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.99■■□□□ 1.27
NDEL1-209ENST00000580738 A0A0U1RQG5 324 aaPredicted RBP22.98■■□□□ 1.27
NDEL1-209ENST00000580738 IGFBP4P22692 258 aa22.98■■□□□ 1.27
NDEL1-209ENST00000580738 CYP2C18P33260 490 aa22.98■■□□□ 1.27
NDEL1-209ENST00000580738 GNASQ5JWF2 1037 aa22.98■■□□□ 1.27
NDEL1-209ENST00000580738 PSRC1Q6PGN9 363 aaPredicted RBP22.98■■□□□ 1.27
NDEL1-209ENST00000580738 ZNF467Q7Z7K2 595 aaPredicted RBP22.98■■□□□ 1.27
NDEL1-209ENST00000580738 CPXCR1Q8N123 301 aa22.98■■□□□ 1.27
NDEL1-209ENST00000580738 FGD4Q96M96 766 aa22.98■■□□□ 1.27
NDEL1-209ENST00000580738 UPF3AQ9H1J1 476 aaKnown RBP22.98■■□□□ 1.27
NDEL1-209ENST00000580738 CXXC1Q9P0U4 656 aaPredicted RBP22.98■■□□□ 1.27
NDEL1-209ENST00000580738 SLC4A4Q9Y6R1 1079 aa22.98■■□□□ 1.27
NDEL1-209ENST00000580738 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
NDEL1-209ENST00000580738 GJA9P57773 515 aa22.97■■□□□ 1.27
NDEL1-209ENST00000580738 MRPS5P82675 430 aaKnown RBP22.97■■□□□ 1.27
NDEL1-209ENST00000580738 KIF1BPQ96EK5 621 aa22.97■■□□□ 1.27
NDEL1-209ENST00000580738 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
NDEL1-209ENST00000580738 CHD7Q9P2D1 2997 aa22.97■■□□□ 1.27
NDEL1-209ENST00000580738 F5H6K3 240 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 CTAGE5O15320 804 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 KLRC3Q07444 240 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 PRPF38AQ8NAV1 312 aaKnown RBP22.96■■□□□ 1.27
NDEL1-209ENST00000580738 PANK1Q8TE04 598 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 DDRGK1Q96HY6 314 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 UHRF1Q96T88 793 aaPredicted RBP22.96■■□□□ 1.27
NDEL1-209ENST00000580738 NKX2-4Q9H2Z4 354 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 ABHD16BQ9H3Z7 469 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 SPC25Q9HBM1 224 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 RAVER2Q9HCJ3 691 aaKnown RBP22.96■■□□□ 1.27
NDEL1-209ENST00000580738 MSRAQ9UJ68 235 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 MYO9BQ13459 2157 aa22.96■■□□□ 1.27
NDEL1-209ENST00000580738 ATP2A1O14983 1001 aa22.95■■□□□ 1.26
NDEL1-209ENST00000580738 NCOR1O75376 2440 aa22.95■■□□□ 1.26
NDEL1-209ENST00000580738 NDUFB10O96000 172 aa22.95■■□□□ 1.26
NDEL1-209ENST00000580738 CD4P01730 458 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 835.5 ms