RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PARP14Q460N5 1801 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 TRIM43BA6NCK2 446 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 GSG1L2A8MUP6 293 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 SLC3A2P08195 630 aaKnown RBP21.36■■□□□ 1.01
MKS1-209ENST00000580127 ZNF865P0CJ78 1059 aaPredicted RBP21.36■■□□□ 1.01
MKS1-209ENST00000580127 FDX1P10109 184 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 RASA1P20936 1047 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 TDO2P48775 406 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 TRIM43Q96BQ3 446 aaPredicted RBP21.36■■□□□ 1.01
MKS1-209ENST00000580127 TOX2Q96NM4 488 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 SEMA6BQ9H3T3 888 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 TMEM39AQ9NV64 488 aa21.36■■□□□ 1.01
MKS1-209ENST00000580127 A0A0C4DFX4 3053 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 MOXD2PA6NHM9 499 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 SMIM22K7EJ46 135 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 ATP2A1O14983 1001 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 SMARCA5O60264 1052 aaPredicted RBP21.35■■□□□ 1.01
MKS1-209ENST00000580127 MAMDC4Q6UXC1 1216 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 ZNF467Q7Z7K2 595 aaPredicted RBP21.35■■□□□ 1.01
MKS1-209ENST00000580127 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.35■■□□□ 1.01
MKS1-209ENST00000580127 CPXCR1Q8N123 301 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 STK11IPQ8N1F8 1099 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 ANKRD35Q8N283 1001 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 PCSK9Q8NBP7 692 aaKnown RBP21.35■■□□□ 1.01
MKS1-209ENST00000580127 REPS2Q8NFH8 660 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 GUCD1Q96NT3 240 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.35■■□□□ 1.01
MKS1-209ENST00000580127 STARD7Q9NQZ5 370 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 FEM1BQ9UK73 627 aa21.35■■□□□ 1.01
MKS1-209ENST00000580127 A0A1W2PQ45 241 aaPredicted RBP21.34■■□□□ 1.01
MKS1-209ENST00000580127 A0A1W2PQY0 241 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 KIAA0355O15063 1070 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 PQBP1O60828 265 aaKnown RBP21.34■■□□□ 1.01
MKS1-209ENST00000580127 CHGBP05060 677 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 TAL1P17542 331 aaPredicted RBP21.34■■□□□ 1.01
MKS1-209ENST00000580127 PDE4BQ07343 736 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 PPP4R3BQ5MIZ7 849 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 C9orf50Q5SZB4 431 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 CCDC174Q6PII3 467 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 SH3RF1Q7Z6J0 888 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 MKL1Q969V6 931 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 VTI1AQ96AJ9 217 aa21.34■■□□□ 1.01
MKS1-209ENST00000580127 NUP88Q99567 741 aaPredicted RBP21.34■■□□□ 1.01
MKS1-209ENST00000580127 MROH7Q68CQ1 1323 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 PATL2C9JE40 543 aaKnown RBP21.33■■□□□ 1.01
MKS1-209ENST00000580127 DUSP11O75319 330 aaKnown RBP21.33■■□□□ 1.01
MKS1-209ENST00000580127 TTLL1O95922 423 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 NDUFB10O96000 172 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 ACLYP53396 1101 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 FPGSQ05932 587 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 CHST13Q8NET6 341 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 KIFC2Q96AC6 838 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 RNPC3Q96LT9 517 aaKnown RBP21.33■■□□□ 1.01
MKS1-209ENST00000580127 GLT1D1Q96MS3 346 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 CDX2Q99626 313 aaPredicted RBP21.33■■□□□ 1.01
MKS1-209ENST00000580127 ABHD16BQ9H3Z7 469 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 DCTPP1Q9H773 170 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 ZHX1Q9UKY1 873 aaPredicted RBP21.33■■□□□ 1.01
MKS1-209ENST00000580127 LTBP2Q14767 1821 aa21.33■■□□□ 1.01
MKS1-209ENST00000580127 ROBO3Q96MS0 1386 aa21.33■■□□□ 1
MKS1-209ENST00000580127 ERC2O15083 957 aa21.32■■□□□ 1
MKS1-209ENST00000580127 OAZ1P54368 228 aa21.32■■□□□ 1
MKS1-209ENST00000580127 ANKRD33Q7Z3H0 272 aa21.32■■□□□ 1
MKS1-209ENST00000580127 OSBP2Q969R2 916 aa21.32■■□□□ 1
MKS1-209ENST00000580127 ELP1O95163 1332 aa21.31■■□□□ 1
MKS1-209ENST00000580127 DNAJC25-GNG10A0A024R161 153 aa21.31■■□□□ 1
MKS1-209ENST00000580127 TMEM265A0A087WTH1 108 aa21.31■■□□□ 1
MKS1-209ENST00000580127 GPAA1O43292 621 aa21.31■■□□□ 1
MKS1-209ENST00000580127 SNAI1O95863 264 aaPredicted RBP21.31■■□□□ 1
MKS1-209ENST00000580127 TSPY3P0CV98 308 aa21.31■■□□□ 1
MKS1-209ENST00000580127 TSPY8P0CW00 308 aa21.31■■□□□ 1
MKS1-209ENST00000580127 ACVR2BQ13705 512 aa21.31■■□□□ 1
MKS1-209ENST00000580127 KCNA10Q16322 511 aa21.31■■□□□ 1
MKS1-209ENST00000580127 CHURC1Q8WUH1 139 aa21.31■■□□□ 1
MKS1-209ENST00000580127 MTMR4Q9NYA4 1195 aa21.31■■□□□ 1
MKS1-209ENST00000580127 ISY1Q9ULR0 285 aaKnown RBP21.31■■□□□ 1
MKS1-209ENST00000580127 ADAMTS4O75173 837 aa21.3■■□□□ 1
MKS1-209ENST00000580127 GMCL1P1Q8NEA9 526 aa21.3■■□□□ 1
MKS1-209ENST00000580127 SLC38A10Q9HBR0 1119 aa21.3■■□□□ 1
MKS1-209ENST00000580127 RAVER2Q9HCJ3 691 aaKnown RBP21.3■■□□□ 1
MKS1-209ENST00000580127 RIPK3Q9Y572 518 aa21.3■■□□□ 1
MKS1-209ENST00000580127 SYNRGQ9UMZ2 1314 aa21.29■■□□□ 1
MKS1-209ENST00000580127 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.29■■□□□ 1
MKS1-209ENST00000580127 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.29■■□□□ 1
MKS1-209ENST00000580127 C6orf222P0C671 652 aaPredicted RBP21.29■■□□□ 1
MKS1-209ENST00000580127 BMP3P12645 472 aa21.29■■□□□ 1
MKS1-209ENST00000580127 GNASQ5JWF2 1037 aa21.29■■□□□ 1
MKS1-209ENST00000580127 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.29■■□□□ 1
MKS1-209ENST00000580127 IFNL3Q8IZI9 196 aa21.29■■□□□ 1
MKS1-209ENST00000580127 KLHDC9Q8NEP7 349 aa21.29■■□□□ 1
MKS1-209ENST00000580127 MAFAQ8NHW3 353 aaPredicted RBP21.29■■□□□ 1
MKS1-209ENST00000580127 CEP95Q96GE4 821 aa21.29■■□□□ 1
MKS1-209ENST00000580127 MYH4Q9Y623 1939 aa21.29■■□□□ 1
MKS1-209ENST00000580127 TLR3O15455 904 aaKnown RBP21.28■■□□□ 1
MKS1-209ENST00000580127 PRDM1O75626 825 aa21.28■■□□□ 1
MKS1-209ENST00000580127 TIMP1P01033 207 aa21.28■■□□□ 1
MKS1-209ENST00000580127 FAAP100Q0VG06 881 aa21.28■■□□□ 1
MKS1-209ENST00000580127 IKQ13123 557 aaPredicted RBP21.28■■□□□ 1
MKS1-209ENST00000580127 SLFN13Q68D06 897 aa21.28■■□□□ 1
MKS1-209ENST00000580127 NEDD1Q8NHV4 660 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms