RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SKIV2LQ15477 1246 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 TMEM179Q6ZVK1 233 aa16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 SIAH1Q8IUQ4 282 aa16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 SNX27Q96L92 541 aa16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 TMX2Q9Y320 296 aa16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 PI4K2BG5E9Z4 385 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 C6orf222P0C671 652 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 GJA9P57773 515 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 NKX3-2P78367 333 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 TNNI3KQ59H18 835 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 OTOP2Q7RTS6 562 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 SLC43A3Q8NBI5 491 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 VCPKMTQ9H867 229 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 ZNF214Q9UL59 606 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 FPGT-TNNI3KV9GXZ4 949 aa16.85■□□□□ 0.29
CSNK1D-211ENST00000579316 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 FAM86C2PA6NEL3 165 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 MPHOSPH10O00566 681 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 MYOGP15173 224 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 STAT3P40763 770 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 SPICE1Q8N0Z3 855 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 REPS2Q8NFH8 660 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 RIOK1Q9BRS2 568 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 HIPK3Q9H422 1215 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 SH2D4AQ9H788 454 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 SPC25Q9HBM1 224 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 SLC4A7Q9Y6M7 1214 aa16.84■□□□□ 0.29
CSNK1D-211ENST00000579316 DNAJC25-GNG10A0A024R161 153 aa16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 VWA5AO00534 786 aa16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 CTAGE5O15320 804 aa16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 ADCY6O43306 1168 aa16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 ZNF467Q7Z7K2 595 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 MAGEB6Q8N7X4 407 aa16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 ARHGEF10LQ9HCE6 1279 aa16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 ZHX1Q9UKY1 873 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-211ENST00000579316 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 PNMA6EA0A0J9YXQ4 647 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 PRR33A8MZF0 331 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 SMIM22K7EJ46 135 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 POLR3DP05423 398 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 MRE11P49959 708 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 GNASQ5JWF2 1037 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 HLA-CQ95604 372 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 VTI1AQ96AJ9 217 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 VWCEQ96DN2 955 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 PPP1R9AQ9ULJ8 1098 aa16.82■□□□□ 0.28
CSNK1D-211ENST00000579316 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 EVX2Q03828 476 aa16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 ICA1Q05084 483 aa16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 RPUSD2Q8IZ73 545 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 SEZ6LQ9BYH1 1024 aa16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 WNT8AQ9H1J5 351 aa16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 FBXO28Q9NVF7 368 aa16.81■□□□□ 0.28
CSNK1D-211ENST00000579316 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 RFXAPO00287 272 aa16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 CCDC144BQ3MJ40 725 aa16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.287e-6■□□□□ 10.8
CSNK1D-211ENST00000579316 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 ABHD16BQ9H3Z7 469 aa16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 CD320Q9NPF0 282 aa16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 SWAP70Q9UH65 585 aa16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 DBNLQ9UJU6 430 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-211ENST00000579316 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 CABYRO75952 493 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 GNAI2P04899 355 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 CA3P07451 260 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 PFKMP08237 780 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 CT47B1P0C2W7 299 aaPredicted RBP16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 TEX13BQ9BXU2 312 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
CSNK1D-211ENST00000579316 MCM3APO60318 1980 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 AKR1B1P15121 316 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 CCL23P55773 120 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 KRT40Q6A162 431 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 DDX11Q96FC9 970 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 FGD4Q96M96 766 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 KATNBL1Q9H079 304 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 MYH8P13535 1937 aa16.78■□□□□ 0.28
CSNK1D-211ENST00000579316 GRIN2DO15399 1336 aa16.77■□□□□ 0.28
CSNK1D-211ENST00000579316 ZBBXA8MT70 800 aa16.77■□□□□ 0.28
CSNK1D-211ENST00000579316 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
CSNK1D-211ENST00000579316 AGBL1Q96MI9 1066 aa16.77■□□□□ 0.28
CSNK1D-211ENST00000579316 CRNKL1Q9BZJ0 848 aaKnown RBP16.77■□□□□ 0.28
CSNK1D-211ENST00000579316 WDFY4Q6ZS81 3184 aa16.77■□□□□ 0.27
CSNK1D-211ENST00000579316 MAGEB6P1A0A0J9YX57 407 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 NHLH1Q02575 133 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 TAP1Q03518 808 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 ITGA7Q13683 1181 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 POLA2Q14181 598 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms