RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 NR1H3Q13133 447 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 ATP2B3Q16720 1220 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 WASHC4Q2M389 1173 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 METTL24Q5JXM2 366 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 RAB44Q7Z6P3 723 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 SUPT20HQ8NEM7 779 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 OTUD7AQ8TE49 926 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 ZNF384Q8TF68 577 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 LPIN2Q92539 896 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 ZBED3Q96IU2 234 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 ZNF512BQ96KM6 892 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 DBNDD2Q9BQY9 259 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 TRIM34Q9BYJ4 488 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 UBE2OQ9C0C9 1292 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 COA1Q9GZY4 146 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 AKTIPQ9H8T0 292 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 DBNDD1Q9H9R9 158 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 CD209Q9NNX6 404 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 SLC6A14Q9UN76 642 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 AOX1Q06278 1338 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 GLTPD2A6NH11 291 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 DBX1A6NMT0 343 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 PSMD14O00487 310 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 HMMRO75330 724 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 RGS9O75916 674 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 DDNO94850 711 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 EGFRP00533 1210 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 VIL1P09327 827 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 MCAMP43121 646 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 PDE4DQ08499 809 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 RASGRF1Q13972 1273 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 TAF7LQ5H9L4 462 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 CCDC102BQ68D86 513 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 PSAPL1Q6NUJ1 521 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 PI16Q6UXB8 463 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 LRRC69Q6ZNQ3 347 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 ZDHHC13Q8IUH4 622 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 LARGE2Q8N3Y3 721 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 ZC3H15Q8WU90 426 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 KIF1BPQ96EK5 621 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 EYA3Q99504 573 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 MXD3Q9BW11 206 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 CHMP4BQ9H444 224 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 IL1RAPL2Q9NP60 686 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 ANKIB1Q9P2G1 1089 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 CEP126Q9P2H0 1117 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 STOML1Q9UBI4 398 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 ZNRF3Q9ULT6 936 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 SALL1Q9NSC2 1324 aa4.67□□□□□ -1.66
SMARCE1-215ENST00000578995 SSC5DA1L4H1 1573 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 MYH4Q9Y623 1939 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 CDK2AP1O14519 115 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 RAB11FIP3O75154 756 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 SLC5A1P13866 664 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 HIBADHP31937 336 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 GDF10P55107 478 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 ZNF280AP59817 542 aaPredicted RBP4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 FKBP1AP62942 108 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 NUCB1Q02818 461 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 TBC1D8BQ0IIM8 1120 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 G3BP1Q13283 466 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 STRIP1Q5VSL9 837 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 ERC1Q8IUD2 1116 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 NIM1KQ8IY84 436 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 C16orf71Q8IYS4 520 aaPredicted RBP4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 ZNF295-AS1Q8N0V1 137 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 GPC2Q8N158 579 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 PI4K2BQ8TCG2 481 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 LRRCC1Q9C099 1032 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 ZC3H12CQ9C0D7 883 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 CCDC8Q9H0W5 538 aaPredicted RBP4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 NMRK2Q9NPI5 230 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 GPRC5DQ9NZD1 345 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 HMG20BQ9P0W2 317 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 STAP2Q9UGK3 403 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 PCDHAC2Q9Y5I4 1007 aa4.66□□□□□ -1.66
SMARCE1-215ENST00000578995 LOC285556D6RIA3 1793 aa4.65□□□□□ -1.66
SMARCE1-215ENST00000578995 USP17L3A6NCW0 530 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 USP17L4A6NCW7 530 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 RAD17O75943 681 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 CYP2E1P05181 493 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 CENPBP07199 599 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 IFIT1P09914 478 aaKnown RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 GMPSP49915 693 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 HIRAP54198 1017 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 GTF2IP78347 998 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 HSP90AB4PQ58FF6 505 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 CIAPIN1Q6FI81 312 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 USP17L1Q7RTZ2 530 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 ZNF804AQ7Z570 1209 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 AACSQ86V21 672 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 SKAP1Q86WV1 359 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 TMEM130Q8N3G9 435 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 PROCA1Q8NCQ7 364 aaPredicted RBP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 TRPM4Q8TD43 1214 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 DPF2Q92785 391 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 GCC1Q96CN9 775 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 ANTXR1Q9H6X2 564 aa4.65□□□□□ -1.67
SMARCE1-215ENST00000578995 PIH1D3Q9NQM4 214 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms